Miyakogusa Predicted Gene

Lj4g3v1259110.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1259110.2 tr|G7JIW4|G7JIW4_MEDTR Asparaginyl-tRNA
synthetase OS=Medicago truncatula GN=MTR_4g100920 PE=3
SV=1,82.83,0,Asn_tRNA_synth,Asparagine-tRNA ligase, class IIb;
coiled-coil,NULL; TRNASYNTHASP,Aspartyl/Asparaginy,CUFF.48715.2
         (1623 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP028401 homologue to UniRef100_A7R6A5 Cluster: Chromos...   741   0.0  

>gnl|LJGI|BP028401 homologue to UniRef100_A7R6A5 Cluster: Chromosome undetermined
            scaffold_1205, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_1205,
            whole genome shotgun sequence - Vitis vinifera (Grape),
            partial (38%)
          Length = 399

 Score =  741 bits (374), Expect = 0.0
 Identities = 397/401 (99%), Gaps = 3/401 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1194 gaagttcgaattcccggtgaaatggggttgtgacctgcagagtgagcatgagcgttatat 1253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399  gaagttcgaattcccggtgaaatggggttgtgacctgcagagtgagcatgagcgttatat 340

                                                                        
Query: 1254 aactgaggaggcatttgatggatgccctgttataatcagagactatccaaaggatattaa 1313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339  aactgaggaggcatttgatggatgccctgttataatcagagactatccaaaggatattaa 280

                                                                        
Query: 1314 ggcattctatatgcgacagaatgatgatggaaaaacagttgcagctatggacatgttggt 1373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279  ggcattctatatgcgacagaatgatgatggaaaaacagttgcagctatggacatgttggt 220

                                                                        
Query: 1374 tccaaagattggtgaacttattggcggaagccaaagagaagaaaggcttgaacatctaga 1433
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219  tccnaagattggtgaacttattggcggaagccaaagagaagaaaggcttgaacatctaga 160

                                                                        
Query: 1434 agctcgtttagatgatttaaagctgaataaggatgcatattggtggtatcttgatttgcg 1493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159  agctcgtttagatgatttaaagctgaataaggatgcatattggtggtatcttgatttgcg 100

                                                                        
Query: 1494 tcgttatggtacagtacctcatgcgggctttggtttggggtttgaaagactcgttcagtt 1553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99   tcgttatggtacagtacctcatgcgggctttggtttggggtttgaaagactcgttcagtt 40

                                                     
Query: 1554 cgcaacagga-atggacaatataagggacgtgagtcctttt 1593
            ||| |||||| |||||| |||||||||||||||||||||||
Sbjct: 39   cgc-acagganatggac-atataagggacgtgagtcctttt 1