Miyakogusa Predicted Gene

Lj4g3v1248000.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1248000.1 Non Chatacterized Hit- tr|I3SF84|I3SF84_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,96.59,1.99993e-41,LSM,Ribonucleoprotein LSM domain; SMALL NUCLEAR
RIBONUCLEOPROTEIN E,NULL; snRNP Sm proteins,Ribonucl,CUFF.48712.1
         (267 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64712 homologue to UniRef100_A7PGU9 Cluster: Chromoso...   529   e-150
gnl|LJGI|TC64448 homologue to UniRef100_A7PGU9 Cluster: Chromoso...   436   e-122

>gnl|LJGI|TC64712 homologue to UniRef100_A7PGU9 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 709

 Score =  529 bits (267), Expect = e-150
 Identities = 267/267 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgagcaccaaggttcagagggttatgacccaacccattaacttgattttcaggttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  atggcgagcaccaaggttcagagggttatgacccaacccattaacttgattttcaggttt 153

                                                                       
Query: 61  cttcagagcaaagcgcgcattcagatttggctctttgagcagaaggatttgaggatcgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cttcagagcaaagcgcgcattcagatttggctctttgagcagaaggatttgaggatcgaa 213

                                                                       
Query: 121 ggccgaatcattggttttgatgaatacatgaatttggttctggatgatgctgaagaagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ggccgaatcattggttttgatgaatacatgaatttggttctggatgatgctgaagaagtt 273

                                                                       
Query: 181 aacgtcaagaaaaatagcagaaagacactagggaggatccttcttaaaggagacaacata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aacgtcaagaaaaatagcagaaagacactagggaggatccttcttaaaggagacaacata 333

                                      
Query: 241 actttgatgatgaacacggggaagtga 267
           |||||||||||||||||||||||||||
Sbjct: 334 actttgatgatgaacacggggaagtga 360


>gnl|LJGI|TC64448 homologue to UniRef100_A7PGU9 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 711

 Score =  436 bits (220), Expect = e-122
 Identities = 250/260 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgagcaccaaggttcagagggttatgacccaacccattaacttgattttcaggttt 60
           |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 106 atggcgagcaccaaagttcagagggttatgacccagcccattaacttgattttcaggttt 165

                                                                       
Query: 61  cttcagagcaaagcgcgcattcagatttggctctttgagcagaaggatttgaggatcgaa 120
           ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 166 cttcaaagcaaagcgcgcattcagatttggctatttgagcagaaggatttgaggattgaa 225

                                                                       
Query: 121 ggccgaatcattggttttgatgaatacatgaatttggttctggatgatgctgaagaagtt 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 226 ggccgaatcattggttttgatgagtacatgaatttggttctggatgatgctgaagaagta 285

                                                                       
Query: 181 aacgtcaagaaaaatagcagaaagacactagggaggatccttcttaaaggagacaacata 240
           ||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 286 aacgtcaagaagaagagcagaaagacattagggaggatccttcttaaaggagacaacata 345

                               
Query: 241 actttgatgatgaacacggg 260
           ||||||||||||||||||||
Sbjct: 346 actttgatgatgaacacggg 365