Miyakogusa Predicted Gene

Lj4g3v1212310.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1212310.2 Non Chatacterized Hit- tr|I1MV77|I1MV77_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21664
PE,85.27,0,alpha/beta knot,NULL; SpoU_methylase,tRNA/rRNA
methyltransferase, SpoU; 23S RRNA METHYLTRANSFERASE,N,CUFF.48635.2
         (1218 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU088830 similar to UniRef100_A7R275 Cluster: Chromosom...   775   0.0  
gnl|LJGI|BP042351 homologue to UniRef100_A7R275 Cluster: Chromos...   325   4e-88

>gnl|LJGI|AU088830 similar to UniRef100_A7R275 Cluster: Chromosome undetermined
            scaffold_406, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_406, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (41%)
          Length = 706

 Score =  775 bits (391), Expect = 0.0
 Identities = 393/394 (99%)
 Strand = Plus / Plus

                                                                        
Query: 825  atttggagcatcagggctggccattgctgataaaaatatcataagtgacaaacagttcca 884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6    atttggagcatcagggctggccattgctgataaaaatatcataagtgacaaacagttcca 65

                                                                        
Query: 885  actaatcagtgtgacagctgaaaagtgggttcctataatagaactcccggtagatagcat 944
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66   actaatcagtgtgacagctgaaaagtgggttcctataatagaactcccggtagatagcat 125

                                                                        
Query: 945  aaaggcgtacttacagaaaaagaagagagaaggatattccatcttgggtttggaacaaac 1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126  aaaggcgtacttacagaaaaagaagagagaaggatattccatcttgggtttggaacaaac 185

                                                                        
Query: 1005 tgcaaacagtgtagcccttgatcagtatgtctttccacaaaaaatggtccttgttctcgg 1064
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186  tgcaaacagtgtagcccttgatcagtatgtctttccacaaaaaatggtccttgttctcgg 245

                                                                        
Query: 1065 ccgagagaaagaaggtatacctgtggatataattcatattttggatgcttgcattgaaat 1124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246  ccgagagaaagaaggtatacctgtggatataattcatattttggatgcttgcattgaaat 305

                                                                        
Query: 1125 tcctcaacttggggttgttagatctctcaatgttcatgtcagtggcgctattgctctctg 1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306  tcctcaacttggggttgttagatctctcaatgttcatgtcagtggcgctattgctctctg 365

                                              
Query: 1185 ggagtacactagacaacagagatctcgttagctt 1218
            ||||||||||| ||||||||||||||||||||||
Sbjct: 366  ggagtacactanacaacagagatctcgttagctt 399


>gnl|LJGI|BP042351 homologue to UniRef100_A7R275 Cluster: Chromosome undetermined
            scaffold_406, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_406, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (17%)
          Length = 450

 Score =  325 bits (164), Expect = 4e-88
 Identities = 173/176 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1043 aaaaaatggtccttgttctcggccgagagaaagaaggtatacctgtggatataattcata 1102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450  aaaaaatggtccttgttctcggccgagagaaagaaggtatacctgtggatataattcata 391

                                                                        
Query: 1103 ttttggatgcttgcattgaaattcctcaacttggggttgttagatctctcaatgttcatg 1162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390  ttttggatgcttgcattgaaattcctcaacttggggttgttagatctctcaatgttcatg 331

                                                                    
Query: 1163 tcagtggcgctattgctctctgggagtacactagacaacagagatctcgttagctt 1218
            |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||
Sbjct: 330  tcagtggcgctattgctctctgggagtacactagcctccagagatctcgttagctt 275