Miyakogusa Predicted Gene
- Lj4g3v1202200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1202200.1 tr|A9SWH0|A9SWH0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_231271,23.84,6e-17,PPR,Pentatricopeptide repeat;
seg,NULL; FAMILY NOT NAMED,NULL; PPR: pentatricopeptide repeat
domain,,CUFF.48622.1
(1273 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72890 similar to UniRef100_A7R575 Cluster: Chromosome... 638 0.0
gnl|LJGI|BW598227 402 e-111
>gnl|LJGI|TC72890 similar to UniRef100_A7R575 Cluster: Chromosome undetermined
scaffold_896, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_896, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(27%)
Length = 473
Score = 638 bits (322), Expect = 0.0
Identities = 328/330 (99%)
Strand = Plus / Plus
Query: 944 cttctcttggcatgtatcgtgaaatcactatcgtgtggggagacattaagagactcatga 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cttctcttggcatgtatcgtgaaatcactatcgtgtggggagacattaagagactcatga 62
Query: 1004 agggtgccgatttagttggaaatagagatttgtatgagttattgctcctaaactttttac 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agggtgccgatttagttggaaatagagatttgtatgagttattgctcctaaactttttac 122
Query: 1064 gtggtggttactttgagagagtgatggaggtcattgatcatatgagaaaccataacatgt 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtggtggttactttgagagagtgatggaggtcattgatcatatgagaaaccataacatgt 182
Query: 1124 atactgacaaatggatgtacaaaagtgagttccttagacttcataagaatctttataggc 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atactgacaaatggatgtacaaaagtgagttccttagacttcataagaatctttataggc 242
Query: 1184 gtttaaaagcatcagatgctagaacagaagcacaaagcaaaaggtttgagcatgttcagg 1243
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtttaaaagcatcagatgctacaacagaagcacaaagcaaaaggtttgagcatgttcagg 302
Query: 1244 aatttaagaaatgggtgggtattgactaaa 1273
||||| ||||||||||||||||||||||||
Sbjct: 303 aatttcagaaatgggtgggtattgactaaa 332
>gnl|LJGI|BW598227
Length = 473
Score = 402 bits (203), Expect = e-111
Identities = 300/331 (90%), Gaps = 1/331 (0%)
Strand = Plus / Plus
Query: 944 cttctcttggcatgtatcgtgaaatcactatcgtgtggggagacattaagagactcatga 1003
||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||
Sbjct: 2 cttctcttggcttgtatcgtgaaatcactatcgtgtggagagacatttagacactcatga 61
Query: 1004 agggtgccgatttagttggaaatagagatttgtatgagttattgctcctaaactttttac 1063
| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 62 atggtgccgatttagttggaaatacagatttgtatgagttattgctccgaaactttttac 121
Query: 1064 gtggtggttactttgagagagtgatggaggtcattgatcatatg-agaaaccataacatg 1122
||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||
Sbjct: 122 ctggtggttactttgagacagtgatggacgtcattgatcatatgcagaaaccaccacatg 181
Query: 1123 tatactgacaaatggatgtacaaaagtgagttccttagacttcataagaatctttatagg 1182
||||||||| ||||||||||||||| ||||||||||| |||||||| |||| ||||| |
Sbjct: 182 tatactgacgaatggatgtacaaaactgagttccttacacttcatactaatccttataag 241
Query: 1183 cgtttaaaagcatcagatgctagaacagaagcacaaagcaaaaggtttgagcatgttcag 1242
||||| |||||||| ||||||| |||| | |||| | ||||||||||||||||||||||
Sbjct: 242 cgtttgaaagcatccgatgctacaacacaggcactcatcaaaaggtttgagcatgttcag 301
Query: 1243 gaatttaagaaatgggtgggtattgactaaa 1273
|||||| | | ||||||||||||||||||||
Sbjct: 302 gaatttcaaacatgggtgggtattgactaaa 332