Miyakogusa Predicted Gene

Lj4g3v1202110.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1202110.1 Non Chatacterized Hit- tr|I1NIT5|I1NIT5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33616
PE,87.5,0.0000000000005, ,CUFF.48617.1
         (162 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64268 homologue to UniRef100_Q5W5X6 Cluster: Zeta-car...   178   7e-45

>gnl|LJGI|TC64268 homologue to UniRef100_Q5W5X6 Cluster: Zeta-carotene desaturase
           ZDS2; n=1; Malus x domestica|Rep: Zeta-carotene
           desaturase ZDS2 - Malus domestica (Apple) (Malus
           sylvestris), partial (25%)
          Length = 725

 Score =  178 bits (90), Expect = 7e-45
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                       
Query: 11  aaggtttagaagtgacttggtcatctgttgttaaaattggccaatctctgtacgccgagg 70
           |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||
Sbjct: 192 aaggtttagaagtgacttggtcatctgttgttaaaattggccaatctctgtaccgtgagg 251

                                                                     
Query: 71  gacttggtaaagatccattcagacctgatcaaaagacacaagtgaagaatttctttct 128
           ||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||||
Sbjct: 252 gacctggtaaagatccatttagacctgatcaaaagacacctgtgaagaatttctttct 309



 Score = 67.9 bits (34), Expect = 2e-11
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 125 ttctgcgtgtatctgcgatgcgggggaagaattactga 162
           |||||| |||||||||||||||||||||||||||||||
Sbjct: 379 ttctgcttgtatctgcgatgcgggggaagaattactga 416