Miyakogusa Predicted Gene

Lj4g3v1176640.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1176640.1 tr|Q7XHJ2|Q7XHJ2_QUERO Expansin-like protein
(Fragment) OS=Quercus robur PE=2 SV=1,40.98,2e-19,no
description,Barwin-like endoglucanase; EXPANSIN_EG45,Expansin/pollen
allergen, DPBB domain; seg,N,CUFF.48587.1
         (555 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61317 similar to UniRef100_A7PCC8 Cluster: Chromosome...   819   0.0  

>gnl|LJGI|TC61317 similar to UniRef100_A7PCC8 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (89%)
          Length = 968

 Score =  819 bits (413), Expect = 0.0
 Identities = 422/425 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctccctctcttttgtgtcttctccttgccacctttcttttcatgcaaactctagca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54  atggctccctctcttttgtgtcttctccttgccacctttcttttcatgcaaactctagca 113

                                                                       
Query: 61  gatacttcatgcacggattgttttgttcaatcccgtgcatcatattaccccaattctgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gatacttcatgcacggattgttttgttcaatcccgtgcatcatattaccccaattctgaa 173

                                                                       
Query: 121 gtaaatggcacagacagtggtgcatgtggatttggttcctttggtgctaccatcaatggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gtaaatggcacagacagtggtgcatgtggatttggttcctttggtgctaccatcaatggc 233

                                                                       
Query: 181 ggggatgtatcggctgcatctagtcgttatcaagatggagttcgctgtggtgcctgttac 240
           ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 234 ggggatgtatcggctgcatctagtctttatcaagatggagttggctgtggtgcctgttac 293

                                                                       
Query: 241 caggtgaggtgtgccaacagcgcatattgctcaggcaacggtgtcactgtagttgtaact 300
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 294 caggtgaggtgtgccaacagcgcttattgctcaggcaacggtgtcactgtagttgtaact 353

                                                                       
Query: 301 gaccaaggctcaggtgataacactgacttcatacttagccaacgagccttcggtaggatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gaccaaggctcaggtgataacactgacttcatacttagccaacgagccttcggtaggatg 413

                                                                       
Query: 361 gctcagaactctgatgcagctgcttctctattagctcttggcgtagttgatattcaatac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gctcagaactctgatgcagctgcttctctattagctcttggcgtagttgatattcaatac 473

                
Query: 421 agacg 425
           |||||
Sbjct: 474 agacg 478



 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 520 gtgtttcatgtagctacccgaacaaaaacatgacaa 555
           ||||||||||||||||||||||||||||||||||||
Sbjct: 478 gtgtttcatgtagctacccgaacaaaaacatgacaa 513