Miyakogusa Predicted Gene
- Lj4g3v1153140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1153140.1 Non Chatacterized Hit- tr|I1Q299|I1Q299_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,70,3e-18,FAMILY
NOT NAMED,NULL; myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF ,Myb
domain, plants; seg,NU,NODE_22406_length_2022_cov_34.155293.path2.1
(1674 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64637 similar to UniRef100_A7PCE1 Cluster: Chromosome... 1148 0.0
gnl|LJGI|TC69198 weakly similar to UniRef100_A7PCE1 Cluster: Chr... 630 e-180
gnl|LJGI|BW619547 similar to UniRef100_Q18PR1 Cluster: Peroxidas... 375 e-103
gnl|LJGI|TC80121 similar to UniRef100_A7PCE1 Cluster: Chromosome... 335 5e-91
gnl|LJGI|BW630747 similar to UniRef100_A7PCE1 Cluster: Chromosom... 98 2e-19
gnl|LJGI|BP042681 similar to UniRef100_A7PCE1 Cluster: Chromosom... 66 8e-10
>gnl|LJGI|TC64637 similar to UniRef100_A7PCE1 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 750
Score = 1148 bits (579), Expect = 0.0
Identities = 605/611 (99%), Gaps = 2/611 (0%)
Strand = Plus / Plus
Query: 1 atggtttgcactgccagtgatttacagcaatggaaagattttccaaaagggcttcgggtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 136 atggtttgcactgccagtgatttacagcaatggaaagattttccaaaagggcttcgggct 195
Query: 61 cttcttcttgaaggagatagcggttctgctaccgagataagagcaaagcttgaggccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cttcttcttgaaggagatagcggttctgctaccgagataagagcaaagcttgaggccatg 255
Query: 121 gactatattgtttttactttctacaatgagaatgaggccttgtcagcaatctctagtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gactatattgtttttactttctacaatgagaatgaggccttgtcagcaatctctagtgat 315
Query: 181 cctgaaggcttccatgttgccgtggtggaggtgagtacaagcagcaaccagggtggtttc 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 316 cctgaaggcttccatgttgccgtggcggaggtgagtacaagcagcaaccagggtggtttc 375
Query: 241 aaattccttgagaatgtgaaggacttgcctaccattatgacttccaacagtcaatgcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaattccttgagaatgtgaaggacttgcctaccattatgacttccaacagtcaatgcctg 435
Query: 301 aatacaatgatgaagtgcatcgcgcttggcgcagttgaattcctcactaaaccactctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aatacaatgatgaagtgcatcgcgcttggcgcagttgaattcctcactaaaccactctct 495
Query: 361 gaggataagctcaaaaatatttggcagcatgtagttcacaaggcattcaatgctgggaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gaggataagctcaaaaatatttggcagcatgtagttcacaaggcattcaatgctgggaca 555
Query: 421 aatgctccgtctgaatcactaagacctgtcaaagaatctgtagagtccattttacagctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aatgctccgtctgaatcactaagacctgtcaaagaatctgtagagtccattttacagctc 615
Query: 481 caaactgataatggacagcatgaaagtaatatttcaatagatatagagaacgtgtccagg 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 616 caaactgataatggacagcatgaaagtaatatttcaatagatatagagagcgtgtccagg 675
Query: 541 ttaggtgataatgaccatgagcagtcggttggaagtgataaatatccggctccttcaacc 600
|| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 676 ttgggtgataatgaccatgagcagtcgg-tggaagtgataaatatccggctccttc-acc 733
Query: 601 ccgcaattaaa 611
|||||||||||
Sbjct: 734 ccgcaattaaa 744
>gnl|LJGI|TC69198 weakly similar to UniRef100_A7PCE1 Cluster: Chromosome chr2
scaffold_11, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_11, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 997
Score = 630 bits (318), Expect = e-180
Identities = 318/318 (100%)
Strand = Plus / Plus
Query: 1357 atgcatgtggatgcatgggggtgtccagtgttgccatctcctcaagcttctccttttccc 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 atgcatgtggatgcatgggggtgtccagtgttgccatctcctcaagcttctccttttccc 89
Query: 1417 tacactcaaaatgtggctgggtggcacaatgctaaagcaatggattatagattcagcatg 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 tacactcaaaatgtggctgggtggcacaatgctaaagcaatggattatagattcagcatg 149
Query: 1477 ccacagagttctgtagagaattatccggcggaggaggtggtggacaaggttgtgaaggag 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ccacagagttctgtagagaattatccggcggaggaggtggtggacaaggttgtgaaggag 209
Query: 1537 gcaatgagcaagccatggctccccttgcccttaggcctcaaacctccttccatggatact 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gcaatgagcaagccatggctccccttgcccttaggcctcaaacctccttccatggatact 269
Query: 1597 gtcttgtctgagctctccagccaaggcatatccggcatcatcccttttagcagcaccaag 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtcttgtctgagctctccagccaaggcatatccggcatcatcccttttagcagcaccaag 329
Query: 1657 ggctctataccccgctga 1674
||||||||||||||||||
Sbjct: 330 ggctctataccccgctga 347
Score = 58.0 bits (29), Expect = 2e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1266 cagtcaaacagctggtgtgcagatttggg 1294
|||||||||||||||||||||||||||||
Sbjct: 1 cagtcaaacagctggtgtgcagatttggg 29
>gnl|LJGI|BW619547 similar to UniRef100_Q18PR1 Cluster: Peroxidase; n=1; Pisum
sativum|Rep: Peroxidase - Pisum sativum (Garden pea),
partial (30%)
Length = 490
Score = 375 bits (189), Expect = e-103
Identities = 189/189 (100%)
Strand = Plus / Plus
Query: 758 gtaaacctgaaaagactctgattaaggaggaagaggcttttgccgatggttccaagggtg 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtaaacctgaaaagactctgattaaggaggaagaggcttttgccgatggttccaagggtg 71
Query: 818 agattgctgtttcacagaatgaagataatagaaagtttctcggcagtgctgagggtaatg 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 agattgctgtttcacagaatgaagataatagaaagtttctcggcagtgctgagggtaatg 131
Query: 878 aatctccaaataaaacaggtgttcttagtgattcctgtgagaagaaagctaatcggaaga 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aatctccaaataaaacaggtgttcttagtgattcctgtgagaagaaagctaatcggaaga 191
Query: 938 agatgaaag 946
|||||||||
Sbjct: 192 agatgaaag 200
>gnl|LJGI|TC80121 similar to UniRef100_A7PCE1 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 737
Score = 335 bits (169), Expect = 5e-91
Identities = 388/461 (84%)
Strand = Plus / Plus
Query: 1 atggtttgcactgccagtgatttacagcaatggaaagattttccaaaagggcttcgggtt 60
||||||| |||||||| ||||||||| ||||||| || ||||| || || || ||||
Sbjct: 166 atggttttcactgccaatgatttacaagaatggaaggactttcccaagggactcaaggtt 225
Query: 61 cttcttcttgaaggagatagcggttctgctaccgagataagagcaaagcttgaggccatg 120
||||| ||||| ||||| || | ||||||| | ||| ||| || || ||||||||||||
Sbjct: 226 cttctccttgagggagacagtgcttctgctgctgagttaaaagataaacttgaggccatg 285
Query: 121 gactatattgtttttactttctacaatgagaatgaggccttgtcagcaatctctagtgat 180
||||||| ||||| ||| |||| |||||||||| ||||||||||||||||| |||
Sbjct: 286 gactataatgtttctacattctgtgatgagaatgaagccttgtcagcaatctcaagtaga 345
Query: 181 cctgaaggcttccatgttgccgtggtggaggtgagtacaagcagcaaccagggtggtttc 240
|| ||||||||||| ||||| | |||||||||||| |||||| |||||| ||||||
Sbjct: 346 ccagaaggcttccacattgccattgtggaggtgagtttaagcagttgccagggaggtttc 405
Query: 241 aaattccttgagaatgtgaaggacttgcctaccattatgacttccaacagtcaatgcctg 300
||||||||| |||||| ||||||||||| |||||||||||||| |||| || ||||||
Sbjct: 406 aaattccttcagaatgccaaggacttgccaaccattatgacttcaaacaaccattgcctg 465
Query: 301 aatacaatgatgaagtgcatcgcgcttggcgcagttgaattcctcactaaaccactctct 360
| || |||||||||||||| |||||||| |||||||| ||||||| |||||||||||
Sbjct: 466 gacaccatgatgaagtgcatagcgcttggtgcagttgagttcctcagcaaaccactctcc 525
Query: 361 gaggataagctcaaaaatatttggcagcatgtagttcacaaggcattcaatgctgggaca 420
||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||
Sbjct: 526 gaggacaagctcaaaaatatctggcagcatgtggttcacaaggcattcaatgctggggca 585
Query: 421 aatgctccgtctgaatcactaagacctgtcaaagaatctgt 461
| || | ||||||||||||| ||||||||||||||||||
Sbjct: 586 agtgtcctttctgaatcactaaaacctgtcaaagaatctgt 626
>gnl|LJGI|BW630747 similar to UniRef100_A7PCE1 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 454
Score = 97.6 bits (49), Expect = 2e-19
Identities = 142/173 (82%)
Strand = Plus / Plus
Query: 1 atggtttgcactgccagtgatttacagcaatggaaagattttccaaaagggcttcgggtt 60
||||||| |||||||| ||||||||| ||||||| || ||||| || || || ||||
Sbjct: 273 atggttttcactgccaatgatttacaagaatggaaggactttcccaagggactcaaggtt 332
Query: 61 cttcttcttgaaggagatagcggttctgctaccgagataagagcaaagcttgaggccatg 120
||||| ||||| ||||| || | ||||||| | ||| ||| || || ||||||||||||
Sbjct: 333 cttctccttgagggagacagtgcttctgctgctgagttaaaagataaacttgaggccatg 392
Query: 121 gactatattgtttttactttctacaatgagaatgaggccttgtcagcaatctc 173
||||||| ||||| ||| |||| |||||||||| |||||||||||||||||
Sbjct: 393 gactataatgtttctacattctgtgatgagaatgaagccttgtcagcaatctc 445
>gnl|LJGI|BP042681 similar to UniRef100_A7PCE1 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 316
Score = 65.9 bits (33), Expect = 8e-10
Identities = 108/133 (81%)
Strand = Plus / Plus
Query: 1 atggtttgcactgccagtgatttacagcaatggaaagattttccaaaagggcttcgggtt 60
||||||| |||||||| ||||||||| ||||||| || ||||| || || || ||||
Sbjct: 179 atggttttcactgccaatgatttacaagaatggaaggactttcccaagggactcaaggtt 238
Query: 61 cttcttcttgaaggagatagcggttctgctaccgagataagagcaaagcttgaggccatg 120
||||| ||||| ||||| || | ||||||| | ||| ||| || || ||||||||||||
Sbjct: 239 cttctccttgagggagacagtgcttctgctgctgagttaaaagataaacttgaggccatg 298
Query: 121 gactatattgttt 133
||||||| |||||
Sbjct: 299 gactataatgttt 311