Miyakogusa Predicted Gene
- Lj4g3v1140660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1140660.1 tr|G7JGI1|G7JGI1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_4g0,80.33,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.48518.1
(2142 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO026414 similar to UniRef100_A7PCA5 Cluster: Chromosom... 1241 0.0
gnl|LJGI|TC71721 similar to UniRef100_A7PCA5 Cluster: Chromosome... 615 e-175
>gnl|LJGI|GO026414 similar to UniRef100_A7PCA5 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 642
Score = 1241 bits (626), Expect = 0.0
Identities = 639/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 1379 tgaataagttgggtattgaactaaacgtgatggggtgcacctgtttgattcagtgcttgg 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaataagttgggtattgaactaaacgtgatggggtgcacctgtttgattcagtgcttgg 61
Query: 1439 gaaaggctatggaaatcgatgatttggttcgagttttcaatgtttcagtggagagaggag 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gaaaggctatggaaatcgatgatttggttcgagttttcaatgtttcagtggagagaggag 121
Query: 1499 ttaaactagatgataggctatgtggttgcttgttatccgttttgtctctatctcaaggta 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttaaactagatgataggctatgtggttgcttgttatccgttttgtctctatctcaaggta 181
Query: 1559 gcaaggatgaggaaaaggtccttgcttgtttgcagcaagctaacccaaaattggttgctt 1618
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 182 gcaaggatgaggaaaaggtccttgcttgtttgcagcatgctaacccaaaattggttgctt 241
Query: 1619 tcattcagttgattgtagatgaggaaactagttttgagactgtgaagggagagttcaagg 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcattcagttgattgtagatgaggaaactagttttgagactgtgaagggagagttcaagg 301
Query: 1679 gtatcataagtaatgccacggttgaggtgagaagacccttctgtaactgcttgattgaca 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtatcataagtaatgccacggttgaggtgagaagacccttctgtaactgcttgattgaca 361
Query: 1739 tatgcagaagcaaagatctccaagagagagctcatgaactactctacttggggaccttgt 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tatgcagaagcaaagatctccaagagagagctcatgaactactctacttggggaccttgt 421
Query: 1799 atggattatacccaggtctgcacagcaagacagagtatgaatggtgtttagacgttcgat 1858
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 422 atggattatacccaggtctgcacagcaagacagagtatgaatggtgtttaggcgttcgat 481
Query: 1859 cattgtcagttggtgcagctctaactgcactagaagagtggatgtggacactcaccaaaa 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cattgtcagttggtgcagctctaactgcactagaagagtggatgtggacactcaccaaaa 541
Query: 1919 ttgttcagcgagaggaggcgctgccggagtatttcttagcccagacaggtactggtgctc 1978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttgttcagcgagaggaggcgctgccggagtatttcttagcccagacaggtactggtgctc 601
Query: 1979 ataagtttgcccaaggattgaacctttcttttgcttctcatg 2020
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 602 ataagtttgcccaa-gattgaacctttcttttgcttctcatg 642
>gnl|LJGI|TC71721 similar to UniRef100_A7PCA5 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 521
Score = 615 bits (310), Expect = e-175
Identities = 310/310 (100%)
Strand = Plus / Plus
Query: 1833 gtatgaatggtgtttagacgttcgatcattgtcagttggtgcagctctaactgcactaga 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtatgaatggtgtttagacgttcgatcattgtcagttggtgcagctctaactgcactaga 61
Query: 1893 agagtggatgtggacactcaccaaaattgttcagcgagaggaggcgctgccggagtattt 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agagtggatgtggacactcaccaaaattgttcagcgagaggaggcgctgccggagtattt 121
Query: 1953 cttagcccagacaggtactggtgctcataagtttgcccaaggattgaacctttcttttgc 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cttagcccagacaggtactggtgctcataagtttgcccaaggattgaacctttcttttgc 181
Query: 2013 ttctcatgtgaggaaactagctgctccatttaggcagagtgaggataaagttggctcttt 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttctcatgtgaggaaactagctgctccatttaggcagagtgaggataaagttggctcttt 241
Query: 2073 tattgcaactagagaggatttagtctcttggatacaatcaaagtttctctcaaccactac 2132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tattgcaactagagaggatttagtctcttggatacaatcaaagtttctctcaaccactac 301
Query: 2133 ggcaacatag 2142
||||||||||
Sbjct: 302 ggcaacatag 311