Miyakogusa Predicted Gene
- Lj4g3v1118390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1118390.1 tr|G7I4W1|G7I4W1_MEDTR Replication factor A
protein OS=Medicago truncatula GN=MTR_1g075850 PE=4
SV=1,22.95,6e-17,seg,NULL; Rep_fac-A_C,Replication factor A,
C-terminal; Nucleic acid-binding proteins,Nucleic acid-b,CUFF.48550.1
(1686 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598865 1053 0.0
gnl|LJGI|BW597797 186 3e-46
gnl|LJGI|TC76709 100 6e-20
>gnl|LJGI|DC598865
Length = 549
Score = 1053 bits (531), Expect = 0.0
Identities = 548/551 (99%), Gaps = 2/551 (0%)
Strand = Plus / Plus
Query: 1041 atatgttggagtgctgaaagcagttgaagttgcttttcaaaggaagctatcggataagta 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atatgttggagtgctgaaagcagttgaagttgcttttcaaaggaagctatcggataagta 60
Query: 1101 tatttttaataatctgggcgagtgtagtagtaaacctgctggtttatcttctttaaaagt 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatttttaataatctgggcgagtgtagtagtaaacctgctggtttatcttctttaaaagt 120
Query: 1161 attatgtcacagttctgagggtgttaaatctgatgattacattaagaagaatgttatcac 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attatgtcacagttctgagggtgttaaatctgatgattacattaagaagaatgttatcac 180
Query: 1221 tgatgatgaggaattagtgatggtccataaatctgtaattgatgttgggggtgatacctt 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatgatgaggaattagtgatggtccataaatctgtaattgatgttgggggtgatacctt 240
Query: 1281 ggagacaatgtcaaaggtagatggggtaaaaagcagtttaactccaatgggaaatgtgag 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggagacaatgtcaaaggtagatggggtaaaaagcagtttaactccaatgggaaatgtgag 300
Query: 1341 ttatttaaggaagaagaaatcgagttgtattgaatttgtggatttgaccatatcagagga 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttatttaaggaagaagaaatcgagttgtattgaatttgtggatttgaccatatcagagga 360
Query: 1401 tggttcaaaaggtttacctgcccttgagtgtaatctgggagagtataggttcagcccaat 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggttcaaaaggtttacctgcccttgagtgtaatctgggagagtataggttcagcccaat 420
Query: 1461 gggaaatgttggttatttaaaggagcagaagtcaagttgtattgaatttgtggatttgac 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gggaaatgttggttatttaaaggagcagaagtcaagttgtattgaatttgtggatttgac 480
Query: 1521 aaaatcagatcatggttgcaatgcttcagtttcatataagtgtaacaacaatcaatatgc 1580
||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||
Sbjct: 481 aaaatcagatcatggttgccatgcttcagtttcatat-agtgtaacaacaat-aatatgc 538
Query: 1581 tgatattactg 1591
|||||||||||
Sbjct: 539 tgatattactg 549
>gnl|LJGI|BW597797
Length = 501
Score = 186 bits (94), Expect = 3e-46
Identities = 160/177 (90%), Gaps = 5/177 (2%)
Strand = Plus / Plus
Query: 1409 aaggtttacctgcc-cttgagtgtaatctgggagagtataggttcagcccaatggg-aaa 1466
||||| |||||||| ||||||||||||||||||||||||||||||||| || |||
Sbjct: 325 aaggtatacctgccacttgagtgtaatctgggagagtataggttcagcgggggggccaaa 384
Query: 1467 tgtt-ggttattta--aaggagcagaagtcaagttgtattgaatttgtggatttgacaaa 1523
|||| |||||| | |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 tgttcggttatctcccaaggagcagaagtcaaaaagtattgaatttgtggatttgacaaa 444
Query: 1524 atcagatcatggttgcaatgcttcagtttcatataagtgtaacaacaatcaatatgc 1580
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atcagatcatggttgcaatgcttcagtttcatataagtgtaacaacaatcaatatgc 501
>gnl|LJGI|TC76709
Length = 495
Score = 99.6 bits (50), Expect = 6e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 1630 caaccaaatgggcaaggggtggatccaactgaagttgttgatcttactttatgaagt 1686
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaccaaatggncagggggtggatccaactgaagttgttgatcttactttatgaagt 57