Miyakogusa Predicted Gene
- Lj4g3v1083830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1083830.1 Non Chatacterized Hit- tr|I1J562|I1J562_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52000
PE,72.78,0,DUF239,Domain of unknown function DUF239; DUF4409,Domain of
unknown function DUF4409; seg,NULL; FAMI,CUFF.48383.1
(1377 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65359 similar to UniRef100_Q84VY0 Cluster: At1g70550;... 212 4e-54
gnl|LJGI|TC69527 similar to UniRef100_Q9LR24 Cluster: F26F24.22;... 167 2e-40
gnl|LJGI|TC68747 similar to UniRef100_A7P093 Cluster: Chromosome... 82 1e-14
gnl|LJGI|TC66427 similar to UniRef100_A7P093 Cluster: Chromosome... 78 2e-13
gnl|LJGI|FS331635 64 2e-09
gnl|LJGI|GO025708 similar to UniRef100_A7PCV6 Cluster: Chromosom... 64 2e-09
gnl|LJGI|TC82766 similar to UniRef100_A7P093 Cluster: Chromosome... 64 2e-09
gnl|LJGI|TC59518 similar to UniRef100_A7P093 Cluster: Chromosome... 64 2e-09
gnl|LJGI|TC80029 similar to UniRef100_A7PZ13 Cluster: Chromosome... 52 9e-06
>gnl|LJGI|TC65359 similar to UniRef100_Q84VY0 Cluster: At1g70550; n=1; Arabidopsis
thaliana|Rep: At1g70550 - Arabidopsis thaliana (Mouse-ear
cress), partial (54%)
Length = 888
Score = 212 bits (107), Expect = 4e-54
Identities = 350/431 (81%)
Strand = Plus / Plus
Query: 784 gaagctggttggcaggtcagccctgagctctatggggacagctaccctagattctttact 843
|||||||| || ||||| || |||||||| |||||||||| ||| ||||| ||||| |||
Sbjct: 116 gaagctggatgacaggttagtcctgagctatatggggacaactatcctaggttcttcact 175
Query: 844 tattggacgagtgatgcatatcaagcaaccgggtgctacaatttactttgctcaggattt 903
|||||||| | ||||||||||||||| || || |||||||| ||| | || |||||||||
Sbjct: 176 tattggactactgatgcatatcaagccactggatgctacaacttattatgttcaggattt 235
Query: 904 gttcaaactaatagcaaaattgcaattggtgctgctatctctccaacttcttcatatgat 963
|| ||||| || | ||| || ||||| || ||||| ||||| |||| ||| | ||| ||
Sbjct: 236 gtccaaacaaacaacaagatagcaataggagctgcaatctccccaagatctgcttataat 295
Query: 964 ggtgggcaatttgatattagcttacttgtctggaaggatccaaagcatggaaattggtgg 1023
|| | | |||||||||| || || | || ||||||||||||||||||||| ||||||||
Sbjct: 296 ggcagacgatttgatattggcataatggtttggaaggatccaaagcatggacattggtgg 355
Query: 1024 cttgaattcggatcagggatcctagttgggtactggccatcattcttgttcacccattta 1083
|| || || |||||||| | |||||||||| |||||| |||||||||||| || ||
Sbjct: 356 ctggagtttggatcaggactgttagttgggtattggccagcattcttgttcagtcacttg 415
Query: 1084 ggggatcatgcaagcatggttcaatttggtggagaaattgtgaattcaatgtcatcaggt 1143
| || |||||||||||||||||||| ||||||||||||||||| ||| |||
Sbjct: 416 agaagccacgcaagcatggttcaatttggaggagaaattgtgaattcccgttcagggggt 475
Query: 1144 tctcacacttccacccaaatgggtagtgggcattttgctgaagagggttttgcaaaagca 1203
| |||||| |||||||||||| ||||| |||||||||||||| |||||| |||||||
Sbjct: 476 taccacactggcacccaaatgggcagtggccattttgctgaagaaggttttagaaaagca 535
Query: 1204 tcatattttag 1214
| ||||||||
Sbjct: 536 gcttattttag 546
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1324 tgggggaattacttttactatggtggtcctggcagaaatgtga 1366
||||||| ||||||||||||||| |||||||| ||||||||||
Sbjct: 656 tgggggacttacttttactatggaggtcctggaagaaatgtga 698
>gnl|LJGI|TC69527 similar to UniRef100_Q9LR24 Cluster: F26F24.22; n=1; Arabidopsis
thaliana|Rep: F26F24.22 - Arabidopsis thaliana (Mouse-ear
cress), partial (21%)
Length = 521
Score = 167 bits (84), Expect = 2e-40
Identities = 213/256 (83%)
Strand = Plus / Plus
Query: 1111 ggtggagaaattgtgaattcaatgtcatcaggttctcacacttccacccaaatgggtagt 1170
|||||||||||||||||||||| | ||||| ||||||| || ||||||||||| |||
Sbjct: 2 ggtggagaaattgtgaattcaagaacttcagggcctcacacatcaacccaaatgggcagt 61
Query: 1171 gggcattttgctgaagagggttttgcaaaagcatcatattttaggaatttgcaggttgtg 1230
||||||||||| | ||| ||||||| |||||| || || ||||| || ||||| ||||||
Sbjct: 62 gggcattttgcaggagaaggttttggaaaagcttcttactttagaaacttgcaagttgtg 121
Query: 1231 gactttgataacaacttggttccattgtcaaatctcaaggttctagcagaccatccgaat 1290
|| | ||||| |||||| | || ||||||||||||||||| ||||| || || |||||
Sbjct: 122 gattgggataataacttgatacccttgtcaaatctcaaggtcctagcggatcactcgaat 181
Query: 1291 tgttatgacatacaaggagggctcaataatgcctgggggaattacttttactatggtggt 1350
|| ||||| || ||||||||| | || || | ||||||||||||||||||||||||||
Sbjct: 182 tgctatgatattcaaggagggattaacaaggtttgggggaattacttttactatggtgga 241
Query: 1351 cctggcagaaatgtga 1366
||||| || |||||||
Sbjct: 242 cctgggaggaatgtga 257
>gnl|LJGI|TC68747 similar to UniRef100_A7P093 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1081
Score = 81.8 bits (41), Expect = 1e-14
Identities = 116/141 (82%)
Strand = Plus / Plus
Query: 769 gatctaaacaccattgaagctggttggcaggtcagccctgagctctatggggacagctac 828
||||| |||| ||||||||||||||||||||| ||||| || | |||||||| | | ||
Sbjct: 37 gatcttaacagcattgaagctggttggcaggttagcccagatttatatggggataacaac 96
Query: 829 cctagattctttacttattggacgagtgatgcatatcaagcaaccgggtgctacaattta 888
| || | || ||||| ||||||||||||||||||||||| || || ||||||||| |
Sbjct: 97 acaaggctattcacttactggacgagtgatgcatatcaagctacaggttgctacaatctt 156
Query: 889 ctttgctcaggatttgttcaa 909
|| |||||||| ||| |||||
Sbjct: 157 ctatgctcagggtttattcaa 177
>gnl|LJGI|TC66427 similar to UniRef100_A7P093 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1896
Score = 77.8 bits (39), Expect = 2e-13
Identities = 123/151 (81%)
Strand = Plus / Plus
Query: 719 atgaattcagcttatctcaaatgtggatcatctctggcacatttgaggaggatctaaaca 778
||||||||||||| |||||||| ||||| | |||| |||||| | ||||| ||||
Sbjct: 842 atgaattcagcttgtctcaaatttggattctggctggtgcatttggtcaagatctcaaca 901
Query: 779 ccattgaagctggttggcaggtcagccctgagctctatggggacagctaccctagattct 838
|||||||||||||||||||||||| || || | ||||| |||| || || || |||
Sbjct: 902 gcattgaagctggttggcaggtcagtccagatttgtatggagacaataacactcgactct 961
Query: 839 ttacttattggacgagtgatgcatatcaagc 869
| ||||||||||| |||||||||||||||||
Sbjct: 962 tcacttattggacaagtgatgcatatcaagc 992
>gnl|LJGI|FS331635
Length = 776
Score = 63.9 bits (32), Expect = 2e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 307 aacaagcctgccattaagacaattcagagtcctgatggtgatataatagactgtgt 362
||||||||| | ||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 363 aacaagcctcctgttaagaccattcagagtccagatggggatataatagactgtgt 418
>gnl|LJGI|GO025708 similar to UniRef100_A7PCV6 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 704
Score = 63.9 bits (32), Expect = 2e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 1155 cacccaaatgggtagtgggcattttgctgaagagggttttgcaaaagcatcatattttag 1214
|||||||||||| ||||| |||||||||||||| |||||| ||||||| | ||||||||
Sbjct: 259 cacccaaatgggcagtggccattttgctgaagaaggttttagaaaagcagcttattttag 318
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1324 tgggggaattacttttactatggtggtcctggcagaaatgtga 1366
||||||| ||||||||||||||| |||||||| ||||||||||
Sbjct: 428 tgggggacttacttttactatggaggtcctggaagaaatgtga 470
>gnl|LJGI|TC82766 similar to UniRef100_A7P093 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1247
Score = 63.9 bits (32), Expect = 2e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 307 aacaagcctgccattaagacaattcagagtcctgatggtgatataatagactgtgt 362
||||||||| | ||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 793 aacaagcctcctgttaagaccattcagagtccagatggggatataatagactgtgt 848
>gnl|LJGI|TC59518 similar to UniRef100_A7P093 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 780
Score = 63.9 bits (32), Expect = 2e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 307 aacaagcctgccattaagacaattcagagtcctgatggtgatataatagactgtgt 362
||||||||| | ||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 306 aacaagcctcctgttaagaccattcagagtccagatggggatataatagactgtgt 361
>gnl|LJGI|TC80029 similar to UniRef100_A7PZ13 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 416
Score = 52.0 bits (26), Expect = 9e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 784 gaagctggttggcaggtcagccctgagctctatggggacagctaccctagattctttact 843
|||||||| ||||||||||| || || ||||||| |||||| || ||||| || |||
Sbjct: 308 gaagctgggtggcaggtcagtccacagatctatggtgacagcagacccagattgttcact 367
Query: 844 tattggacgagtga 857
||||||||||||||
Sbjct: 368 tattggacgagtga 381