Miyakogusa Predicted Gene
- Lj4g3v1083800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1083800.1 Non Chatacterized Hit- tr|I1JC59|I1JC59_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95,0,CLATHRIN COAT
ASSEMBLY PROTEIN AP-1,NULL; CLATHRIN COAT ASSEMBLY PROTEIN,NULL;
CLAT_ADAPTOR_M_2,Clat,CUFF.48373.1
(666 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71026 similar to UniRef100_A7QY06 Cluster: Chromosome... 1281 0.0
gnl|LJGI|TC66040 homologue to UniRef100_A7QY06 Cluster: Chromoso... 795 0.0
>gnl|LJGI|TC71026 similar to UniRef100_A7QY06 Cluster: Chromosome undetermined
scaffold_235, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_235,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 1092
Score = 1281 bits (646), Expect = 0.0
Identities = 659/662 (99%), Gaps = 1/662 (0%)
Strand = Plus / Plus
Query: 5 ctgagtgtaaacttggattaaatgatagagtattattagaggctcaaggtagaacggcca 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 22 ctgagtgtaaacttggattaaatgatagagtattat-agaggctcaaggtagaacggcca 80
Query: 65 agggaaaagcaattgacttggaggacatcaaatttcatcagtgtgtgcgcctggcccgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 agggaaaagcaattgacttggaggacatcaaatttcatcagtgtgtgcgcctggcccgat 140
Query: 125 ttgaaaatgatcgaacgatttcctttatcccacctgatggatcgtttgatttgatgacat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ttgaaaatgatcgaacgatttcctttatcccacctgatggatcgtttgatttgatgacat 200
Query: 185 ataggctcaatacacaggttaagcctttattttgggtggaagcacaagttgaaaagcatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataggctcaatacacaggttaagcctttattttgggtggaagcacaagttgaaaagcatt 260
Query: 245 caaaaagccgaattgagattatggttaaagctaggagtcaatttaaggaacgtagcactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaaagccgaattgagattatggttaaagctaggagtcaatttaaggaacgtagcactg 320
Query: 305 ccacaaatgttgagattgagttgcctgtgcctgttgattcgaccaacccaactgttcgga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacaaatgttgagattgagttgcctgtgcctgttgattcgaccaacccaactgttcgga 380
Query: 365 cttcaatgggatctgcatcatatgcaccggaaaaggatgcattagtctggaaaataagat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcaatgggatctgcatcatatgcaccggaaaaggatgcattagtctggaaaataagat 440
Query: 425 cctttcctggaggcaaggagtacatgttaagagcagagtttcttcttcccagtataacag 484
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 cctttcctggaggcaaggagtacatgttaagagcagagttttttcttcccagtataacag 500
Query: 485 acgaggatgcaactcctgagagaaaagctcctatacgtgtgaaatttgagataccatatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acgaggatgcaactcctgagagaaaagctcctatacgtgtgaaatttgagataccatatt 560
Query: 545 ttactgtgtctgggatacaggtaagatatctgaagattattgagaaaagtgggtatcagt 604
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttactgcgtctgggatacaggtaagatatctgaagattattgagaaaagtgggtatcagt 620
Query: 605 ctcttccatgggtgagatatataacaatggctggagagtatgaactgaggctgatttgag 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcttccatgggtgagatatataacaatggctggagagtatgaactgaggctgatttgag 680
Query: 665 tt 666
||
Sbjct: 681 tt 682
>gnl|LJGI|TC66040 homologue to UniRef100_A7QY06 Cluster: Chromosome undetermined
scaffold_235, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_235, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 1716
Score = 795 bits (401), Expect = 0.0
Identities = 597/661 (90%), Gaps = 1/661 (0%)
Strand = Plus / Plus
Query: 1 atgcctgagtgtaaacttggattaaatgatagagtattattagaggctcaaggtagaacg 60
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 657 atgcctgagtgtaaacttggcttaaatgatagagtattattagaggcgcaaggtagaaca 716
Query: 61 gccaagggaaaagcaattgacttggaggacatcaaatttcatcagtgtgtgcgcctggcc 120
|||| ||||| || || |||||||| |||||||||||||| |||||||| || ||||
Sbjct: 717 accaaaggaaaggcgatagacttggaagacatcaaatttcaccagtgtgtccgtttggct 776
Query: 121 cgatttgaaaatgatcgaacgatttcctttatcccacctgatggatcgtttgatttgatg 180
|||||||||| |||||||| |||||||| || |||||||||||| | ||||||||||||
Sbjct: 777 cgatttgaaac-gatcgaacaatttccttcataccacctgatggagcatttgatttgatg 835
Query: 181 acatataggctcaatacacaggttaagcctttattttgggtggaagcacaagttgaaaag 240
||||| ||||||| ||||||||||||||| ||| |||||||||||||| |||||||||
Sbjct: 836 acatacaggctcagtacacaggttaagccattaatttgggtggaagcaactgttgaaaag 895
Query: 241 cattcaaaaagccgaattgagattatggttaaagctaggagtcaatttaaggaacgtagc 300
||||| ||||| || |||||||| ||||| |||||||| |||||||||||||||||||||
Sbjct: 896 cattctaaaagtcggattgagataatggtaaaagctagaagtcaatttaaggaacgtagc 955
Query: 301 actgccacaaatgttgagattgagttgcctgtgcctgttgattcgaccaacccaactgtt 360
|||||||||||||||||||||||||||||||||||||||||| | | || |||| ||||
Sbjct: 956 actgccacaaatgttgagattgagttgcctgtgcctgttgatgcaatgaatccaaatgtt 1015
Query: 361 cggacttcaatgggatctgcatcatatgcaccggaaaaggatgcattagtctggaaaata 420
|| |||||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||
Sbjct: 1016 cgaacttcaatgggatctgcagcatatgcacctgaaaaagatgcattaatctggaaaatt 1075
Query: 421 agatcctttcctggaggcaaggagtacatgttaagagcagagtttcttcttcccagtata 480
||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 1076 cgatccttccctggaggcaaggagtatatgttaagagcagagtttcgtcttcccagtata 1135
Query: 481 acagacgaggatgcaactcctgagagaaaagctcctatacgtgtgaaatttgagatacca 540
|||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1136 acagctgaggaagcaacccctgagagaaaagctcctatacgtgtgaaatttgaaatacct 1195
Query: 541 tattttactgtgtctgggatacaggtaagatatctgaagattattgagaaaagtgggtat 600
||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1196 tattttactgtttctggaatacaggtaagatatttgaagattattgagaaaagtgggtat 1255
Query: 601 cagtctcttccatgggtgagatatataacaatggctggagagtatgaactgaggctgatt 660
||| ||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 1256 caggctcttccgtgggtgagatacataacaatggctggagagtatgaactaaggcttatt 1315
Query: 661 t 661
|
Sbjct: 1316 t 1316