Miyakogusa Predicted Gene

Lj4g3v1073530.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1073530.1 Non Chatacterized Hit- tr|I1HXY1|I1HXY1_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,63.75,3e-19,RNA
PROCESSING PROTEIN LD23810P,NULL; coiled-coil,NULL;
seg,NULL,CUFF.48363.1
         (2742 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS337613 similar to UniRef100_A7P661 Cluster: Chromosom...   242   1e-62

>gnl|LJGI|FS337613 similar to UniRef100_A7P661 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 598

 Score =  242 bits (122), Expect = 1e-62
 Identities = 122/122 (100%)
 Strand = Plus / Plus

                                                                       
Query: 92  ccgctcgcttgtatgctgaatttgtagagtcatttcaaggggatatcacgcctgggtcaa 151
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ccgctcgcttgtatgctgaatttgtagagtcatttcaaggggatatcacgcctgggtcaa 353

                                                                       
Query: 152 agacttttgtccgaggaggaacaatcaatcccaacgaaaaattgaaagatgattctgagg 211
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 agacttttgtccgaggaggaacaatcaatcccaacgaaaaattgaaagatgattctgagg 413

             
Query: 212 gt 213
           ||
Sbjct: 414 gt 415



 Score =  127 bits (64), Expect = 4e-28
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                       
Query: 379 atggaggagctaaagcatgagcaagagatgagggagaaacgaaatcaagaacgtgaaaat 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atggaggagctaaagcatgagcaagagatgagggagaaacgaaatcaagaacgtgaaaat 594

               
Query: 439 tggc 442
           ||||
Sbjct: 595 tggc 598



 Score = 79.8 bits (40), Expect = 8e-14
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                   
Query: 1   atgagttcgttctccatcacacggaaaaagacgccgttcc 40
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atgagttcgttctccatcacacggaaaaagacgccgttcc 242



 Score = 75.8 bits (38), Expect = 1e-12
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 257 ggtatgttccatcttttataccacctccactggcaacc 294
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ggtatgttccatcttttataccacctccactggcaacc 450