Miyakogusa Predicted Gene

Lj4g3v1072330.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1072330.1 Non Chatacterized Hit- tr|F6I4W9|F6I4W9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.1,3e-19,coiled-coil,NULL,gene.g53764.t1.1
         (501 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79578 weakly similar to UniRef100_A7QQF0 Cluster: Chr...    62   3e-09

>gnl|LJGI|TC79578 weakly similar to UniRef100_A7QQF0 Cluster: Chromosome undetermined
           scaffold_142, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_142,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (12%)
          Length = 1029

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                       
Query: 121 gagtctgagcttgagacccttttcaggcaaaaggttgaagctgagattgaataccttacc 180
           ||||||||| |||||  ||| || ||||||||| | ||||||||||||||||||||  ||
Sbjct: 632 gagtctgaggttgagggcctctttaggcaaaagatcgaagctgagattgaatacctagcc 691

                                          
Query: 181 atcactaagacgatgcagaacttgaaggctg 211
           ||  | |||  |||||| |||||||||||||
Sbjct: 692 atatcaaaggtgatgcaaaacttgaaggctg 722