Miyakogusa Predicted Gene

Lj4g3v1062150.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1062150.1 tr|I1N651|I1N651_SOYBN Structural maintenance of
chromosomes protein OS=Glycine max GN=Gma.41604 PE=,84.99,0,STRUCTURAL
MAINTENANCE OF CHROMOSOMES SMC4,NULL; STRUCTURAL MAINTENANCE OF
CHROMOSOMES SMC FAMILY ME,CUFF.48332.1
         (1902 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP037703 homologue to UniRef100_A7R831 Cluster: Chromos...   515   e-145

>gnl|LJGI|BP037703 homologue to UniRef100_A7R831 Cluster: Chromosome undetermined
            scaffold_2214, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_2214,
            whole genome shotgun sequence - Vitis vinifera (Grape),
            partial (22%)
          Length = 448

 Score =  515 bits (260), Expect = e-145
 Identities = 269/272 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1631 cattagctcttgtatttgctcttcatcattacaagcctaccccgctttatgtaatggatg 1690
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 448  cattagctcttgtatttgctcttcatcattaccagcctaccccgctttatgtaatggatg 389

                                                                        
Query: 1691 aaatcgatgctgccctggacttcaagaatgtatctattgttgggcattacgtgaaagaca 1750
            ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 388  aaatcgatgctgctctggacttcaagaatgtatctattgttggccattacgtgaaagaca 329

                                                                        
Query: 1751 ggaccaaggatgctcaattcataatcattagccttaggaacaatatgtttgaattggctg 1810
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328  ggaccaaggatgctcaattcataatcattagccttaggaacaatatgtttgaattggctg 269

                                                                        
Query: 1811 atcgtcttgttggtatttataaaactgataattgcacgaagagcatcactatcgatccac 1870
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268  atcgtcttgttggtatttataaaactgataattgcacgaagagcatcactatcgatccac 209

                                            
Query: 1871 gtagctttgtcgtgtgccaaaaagctgtttga 1902
            ||||||||||||||||||||||||||||||||
Sbjct: 208  gtagctttgtcgtgtgccaaaaagctgtttga 177