Miyakogusa Predicted Gene

Lj4g3v1062140.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1062140.1 Non Chatacterized Hit- tr|I1MML8|I1MML8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,44.19,0.14,seg,NULL;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; ZINC_FINGER_C2H2_1,Zinc finger,
C2H2,gene.g53745.t1.1
         (681 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82410 UniRef100_UPI0000077CB8 Cluster: Y24F12A.4; n=1...   280   1e-74

>gnl|LJGI|TC82410 UniRef100_UPI0000077CB8 Cluster: Y24F12A.4; n=1; Caenorhabditis
           elegans|Rep: Y24F12A.4 - Caenorhabditis elegans, partial
           (5%)
          Length = 944

 Score =  280 bits (141), Expect = 1e-74
 Identities = 259/300 (86%), Gaps = 15/300 (5%)
 Strand = Plus / Plus

                                                                       
Query: 267 gagggaaattacgccgtgtggaaatatttggagtggccgccgcttcaacattgcggcggc 326
           ||||||||||||||||||| | || |||||||||||| ||||||||||||||||||||||
Sbjct: 350 gagggaaattacgccgtgtcggaacatttggagtggctgccgcttcaacattgcggcggc 409

                                                                       
Query: 327 aatggcggcggcggacggtgatgtggacacgttctgccattcttcttctgcggttgaacg 386
                       | |||||| ||  |||||||||||||||||||||||||||  ||||| 
Sbjct: 410 ------------gtacggtggtgatgacacgttctgccattcttcttctgcgtctgaaca 457

                                                                       
Query: 387 ctctggggtttacttatctgatggctctgttttccgatcatggcctctgtcttgcaaaag 446
           |||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ctctgatgattacttatctgatggctctgttttccgatcatggcctctgtcttgcaaaag 517

                                                                       
Query: 447 aatccgcaaaccaagattatcccctcg---ccgccgccgccgtggaaattcttgttcgga 503
           || ||||||||| ||||| ||||||||   ||||||||||||||||| ||||||||||||
Sbjct: 518 aagccgcaaaccgagattgtcccctcgcctccgccgccgccgtggaagttcttgttcgga 577

                                                                       
Query: 504 agttgaagttgatcctcttatgctagaagcagcggaaactctcatgttgttggcaaatgg 563
           ||| ||||| || |||||||||| |||||| ||| | |||||||| ||||||||||||||
Sbjct: 578 agtggaagtcgaccctcttatgcaagaagctgcgtatactctcattttgttggcaaatgg 637



 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 70  tctgtttatgctctgaatggacacaccagaatgca 104
           |||||||||||| |||| |||||||||||||||||
Sbjct: 204 tctgtttatgctttgaacggacacaccagaatgca 238