Miyakogusa Predicted Gene
- Lj4g3v1062130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1062130.1 Non Chatacterized Hit- tr|I1L4N8|I1L4N8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38496
PE,74.56,0,TRANSCRIPTION INITIATION FACTOR IA (RRN3),RNA polymerase I
specific transcription initiation factor ,CUFF.48341.1
(1668 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63627 weakly similar to UniRef100_A7QSS8 Cluster: Chr... 1445 0.0
gnl|LJGI|TC73831 similar to UniRef100_A7QSS8 Cluster: Chromosome... 755 0.0
>gnl|LJGI|TC63627 weakly similar to UniRef100_A7QSS8 Cluster: Chromosome chr4
scaffold_162, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 802
Score = 1445 bits (729), Expect = 0.0
Identities = 729/729 (100%)
Strand = Plus / Plus
Query: 1 atgggcatggtgccgattggtgacaaggaagagtatcctactccgatggagaatcctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atgggcatggtgccgattggtgacaaggaagagtatcctactccgatggagaatcctcaa 133
Query: 61 ctctctgatttgcagttggtgtatcatgtcagagacgcacttgttgctgtcaccttgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ctctctgatttgcagttggtgtatcatgtcagagacgcacttgttgctgtcaccttgggt 193
Query: 121 gaaagagagaattacgatgaccttgttggttgcttgtttcgtcctttgaattggacactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gaaagagagaattacgatgaccttgttggttgcttgtttcgtcctttgaattggacactc 253
Query: 181 aagaaaaagcatctcaacgaggatgagattgctctggttgtgacaactttaaatgcgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aagaaaaagcatctcaacgaggatgagattgctctggttgtgacaactttaaatgcgctt 313
Query: 241 gcaggagcggtgtcctacattgatttttcccatcacaacgcgcttctttctgcggtttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gcaggagcggtgtcctacattgatttttcccatcacaacgcgcttctttctgcggtttca 373
Query: 301 agtatgagtttgtgggattatggaaccaatgttatggatgcactcactgaactcattgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agtatgagtttgtgggattatggaaccaatgttatggatgcactcactgaactcattgtg 433
Query: 361 tccttggcttctaccaatgtaaaatacatggatttgtgtctggagatgctggttgaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tccttggcttctaccaatgtaaaatacatggatttgtgtctggagatgctggttgaaaat 493
Query: 421 ttcatcccaccaaacatgaaatattttctgagcctgaggaatggacttgacaggaaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttcatcccaccaaacatgaaatattttctgagcctgaggaatggacttgacaggaaaaat 553
Query: 481 aaagttctagctcgggtccatactgctttggaacaaatagctgagttggtgccccttgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aaagttctagctcgggtccatactgctttggaacaaatagctgagttggtgccccttgca 613
Query: 541 ccgttgcgtctgtctaaaatagttctccagaaaatgcccaatgtcttcagtggggaacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ccgttgcgtctgtctaaaatagttctccagaaaatgcccaatgtcttcagtggggaacat 673
Query: 601 atgattgtcatgtatgtggagaatatgttaaggctggagagtggttcaattggagaaacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 atgattgtcatgtatgtggagaatatgttaaggctggagagtggttcaattggagaaacc 733
Query: 661 tttggtggtgcaatgctgcccgcgcttgtggacaggttgatacagttggatgtggaaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tttggtggtgcaatgctgcccgcgcttgtggacaggttgatacagttggatgtggaaatt 793
Query: 721 ggatgggac 729
|||||||||
Sbjct: 794 ggatgggac 802
>gnl|LJGI|TC73831 similar to UniRef100_A7QSS8 Cluster: Chromosome chr4 scaffold_162,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_162, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 900
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 1288 ggatgccaggccatcatgtatgttctttgctttcgcatgagatcattggtggatattcca 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgccaggccatcatgtatgttctttgctttcgcatgagatcattggtggatattcca 60
Query: 1348 aggcttaagttgcaacttcacaatatgcccatggagccaatctggaaacataaattgagt 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggcttaagttgcaacttcacaatatgcccatggagccaatctggaaacataaattgagt 120
Query: 1408 cccttgaaggtgtgtttgcctacggtagtagaggaatttctcagacaggcgaaggctgct 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccttgaaggtgtgtttgcctacggtagtagaggaatttctcagacaggcgaaggctgct 180
Query: 1468 caacttttcatgtcctcctcagagacatttgttttcaatgatttgcttgagtctgatgat 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caacttttcatgtcctcctcagagacatttgttttcaatgatttgcttgagtctgatgat 240
Query: 1528 ctttccaggtcttttggtgggatggatagacttgatatgttcttcccatttgatccatgt 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctttccaggtcttttggtgggatggatagacttgatatgttcttcccatttgatccatgt 300
Query: 1588 ctattgaaaaagagtgaaagctacataaggccacattttgtccggtggtcaagagtgaaa 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctattgaaaaagagtgaaagctacataaggccacattttgtccggtggtcaagagtgaaa 360
Query: 1648 actacatatgatagtgatgac 1668
|||||||||||||||||||||
Sbjct: 361 actacatatgatagtgatgac 381