Miyakogusa Predicted Gene

Lj4g3v1061080.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1061080.2 Non Chatacterized Hit- tr|D3BS35|D3BS35_POLPA
Putative nucleolar protein OS=Polysphondylium
pallidum,41.89,3e-18,SUBFAMILY NOT NAMED,NULL; NOP2(YEAST)-RELATED
NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING,NULL; no descript,CUFF.48326.2
         (1176 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS339163 similar to UniRef100_A7QDW6 Cluster: Chromosom...  1152   0.0  

>gnl|LJGI|FS339163 similar to UniRef100_A7QDW6 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 644

 Score = 1152 bits (581), Expect = 0.0
 Identities = 581/581 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaacacgccgcaaaggcgccattaccagaagctttccttcacttcctggaggccaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  atggaacacgccgcaaaggcgccattaccagaagctttccttcacttcctggaggccaat 123

                                                                       
Query: 61  gggctcgacccatccatctacaccgccgtcgattccaccccacgatacattcggttgaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gggctcgacccatccatctacaccgccgtcgattccaccccacgatacattcggttgaaa 183

                                                                       
Query: 121 cccggttgcgaagcttgtcttgaagaggttgaagcagaggtgaaatgcaagctcgagaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cccggttgcgaagcttgtcttgaagaggttgaagcagaggtgaaatgcaagctcgagaaa 243

                                                                       
Query: 181 ttggaatggttgccagggttttactctcttcctcctcatgttcacattgctggctctaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttggaatggttgccagggttttactctcttcctcctcatgttcacattgctggctctaag 303

                                                                       
Query: 241 ccttacaaagaagggaagatatatggaattgatgcatcttcaggagctgctgttatggct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ccttacaaagaagggaagatatatggaattgatgcatcttcaggagctgctgttatggct 363

                                                                       
Query: 301 ttagatatatcacctggggatcatgtcctggacctatgtgctgctcctggtgctaaactt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttagatatatcacctggggatcatgtcctggacctatgtgctgctcctggtgctaaactt 423

                                                                       
Query: 361 tgtatgatactagaccttcttggtgattctggctctgttacgggagttgatgctgcgagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgtatgatactagaccttcttggtgattctggctctgttacgggagttgatgctgcgagg 483

                                                                       
Query: 421 catcgattggcagcatgtagaacaatgctgcagaaatataaactgggtgatcgatgccgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 catcgattggcagcatgtagaacaatgctgcagaaatataaactgggtgatcgatgccgg 543

                                                                       
Query: 481 ctttttgttgctgatggaacagcattttcagttattcctcaggggttttgttcggattct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctttttgttgctgatggaacagcattttcagttattcctcaggggttttgttcggattct 603

                                                    
Query: 541 aaatcatgcgagtctggattggaagagagaatggatgtgtt 581
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aaatcatgcgagtctggattggaagagagaatggatgtgtt 644