Miyakogusa Predicted Gene

Lj4g3v1037650.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1037650.2 tr|G7LC44|G7LC44_MEDTR DNA-(Apurinic or
apyrimidinic site) lyase OS=Medicago truncatula
GN=MTR_8g075,78.44,0,DNase
I-like,Endonuclease/exonuclease/phosphatase; SUBFAMILY NOT NAMED,NULL;
AP ENDONUCLEASE,Exodeox,CUFF.48310.2
         (1851 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW596087 similar to UniRef100_UPI00005DC310 Cluster: en...   648   0.0  
gnl|LJGI|FS335445 similar to UniRef100_UPI00005DC310 Cluster: en...   224   2e-57

>gnl|LJGI|BW596087 similar to UniRef100_UPI00005DC310 Cluster:
           endonuclease/exonuclease/phosphatase family protein;
           n=1; Arabidopsis thaliana|Rep:
           endonuclease/exonuclease/phosphatase family protein -
           Arabidopsis thaliana, partial (17%)
          Length = 468

 Score =  648 bits (327), Expect = 0.0
 Identities = 327/327 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaatagttacatacaacgtgaacggcctgagacagcgcatagcgcagttcggttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atgaaaatagttacatacaacgtgaacggcctgagacagcgcatagcgcagttcggttct 201

                                                                       
Query: 61  ctccggaatcttctaaattcattcgacgccgacatcatttgctttcaggagaccaaactc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctccggaatcttctaaattcattcgacgccgacatcatttgctttcaggagaccaaactc 261

                                                                       
Query: 121 aggaggcaggacctcactgcggatctcgttatggccgatggctatgaatctttcttctcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aggaggcaggacctcactgcggatctcgttatggccgatggctatgaatctttcttctcc 321

                                                                       
Query: 181 tgcacccgcacctccgacaagggccgcaccggttattccggtgttattacattttgtcgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgcacccgcacctccgacaagggccgcaccggttattccggtgttattacattttgtcgt 381

                                                                       
Query: 241 gtgaagtctgcattttcgagtaatgaagtggccttgccccttgcggctgaggaaggtttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtgaagtctgcattttcgagtaatgaagtggccttgccccttgcggctgaggaaggtttc 441

                                      
Query: 301 actggtcttatgggcgactctcaaact 327
           |||||||||||||||||||||||||||
Sbjct: 442 actggtcttatgggcgactctcaaact 468


>gnl|LJGI|FS335445 similar to UniRef100_UPI00005DC310 Cluster:
           endonuclease/exonuclease/phosphatase family protein;
           n=1; Arabidopsis thaliana|Rep:
           endonuclease/exonuclease/phosphatase family protein -
           Arabidopsis thaliana, partial (6%)
          Length = 145

 Score =  224 bits (113), Expect = 2e-57
 Identities = 113/113 (100%)
 Strand = Plus / Plus

                                                                       
Query: 110 agaccaaactcaggaggcaggacctcactgcggatctcgttatggccgatggctatgaat 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agaccaaactcaggaggcaggacctcactgcggatctcgttatggccgatggctatgaat 60

                                                                
Query: 170 ctttcttctcctgcacccgcacctccgacaagggccgcaccggttattccggt 222
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctttcttctcctgcacccgcacctccgacaagggccgcaccggttattccggt 113