Miyakogusa Predicted Gene

Lj4g3v1037460.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1037460.1 CUFF.48294.1
         (1599 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS342000 similar to UniRef100_A7NSX3 Cluster: Chromosom...   107   2e-22
gnl|LJGI|TC68654 similar to UniRef100_A7NSX3 Cluster: Chromosome...   107   2e-22

>gnl|LJGI|FS342000 similar to UniRef100_A7NSX3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 605

 Score =  107 bits (54), Expect = 2e-22
 Identities = 132/158 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 tggagaggggattcagggctacgagatgggagtgaagcgaatttggatttgtctaaagga 318
           ||||||||||||||||  |||   ||||| ||  |||||||  ||||| | || ||||||
Sbjct: 433 tggagaggggattcagctctaaaggatggaagccaagcgaaactggatctatcaaaagga 492

                                                                       
Query: 319 atgtatgatgctggtgacctcatgaagtttgggtttcccatggctttcactgctactgtg 378
           |||||||||||||| || | |||||||||||| |||||||||||||| ||||| || |||
Sbjct: 493 atgtatgatgctggggatcacatgaagtttggttttcccatggcttttactgccacggtg 552

                                                 
Query: 379 ctttcttgggccattcttgagtatggagatcacatgga 416
            | || ||||||||||| || ||||||||||| |||||
Sbjct: 553 ttatcatgggccattctggaatatggagatcaaatgga 590


>gnl|LJGI|TC68654 similar to UniRef100_A7NSX3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 740

 Score =  107 bits (54), Expect = 2e-22
 Identities = 132/158 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 tggagaggggattcagggctacgagatgggagtgaagcgaatttggatttgtctaaagga 318
           ||||||||||||||||  |||   ||||| ||  |||||||  ||||| | || ||||||
Sbjct: 270 tggagaggggattcagctctaaaggatggaagccaagcgaaactggatctatcaaaagga 329

                                                                       
Query: 319 atgtatgatgctggtgacctcatgaagtttgggtttcccatggctttcactgctactgtg 378
           |||||||||||||| || | |||||||||||| |||||||||||||| ||||| || |||
Sbjct: 330 atgtatgatgctggggatcacatgaagtttggttttcccatggcttttactgccacggtg 389

                                                 
Query: 379 ctttcttgggccattcttgagtatggagatcacatgga 416
            | || ||||||||||| || ||||||||||| |||||
Sbjct: 390 ttatcatgggccattctggaatatggagatcaaatgga 427