Miyakogusa Predicted Gene
- Lj4g3v1022130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1022130.1 CUFF.48274.1
(774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63743 similar to UniRef100_A7R0J6 Cluster: Chromosome... 1485 0.0
gnl|LJGI|AV774311 194 6e-49
gnl|LJGI|BP032136 UniRef100_A7R0J6 Cluster: Chromosome undetermi... 66 3e-10
>gnl|LJGI|TC63743 similar to UniRef100_A7R0J6 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310,
whole genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 1187
Score = 1485 bits (749), Expect = 0.0
Identities = 766/774 (98%)
Strand = Plus / Plus
Query: 1 atgactgtatctgggttgagtggttgtctttcaagatgtccccatttacctcctggttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 atgactgtatctgggttgagtggttgtctttcaagatgtccccatttacctcctggttgc 228
Query: 61 ttggcatcaccccatgtccgggttatggccttatctgtggctgggaaacgtaaacaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ttggcatcaccccatgtccgggttatggccttatctgtggctgggaaacgtaaacaaggg 288
Query: 121 acaatgtgtctccgagtggaaagaacaagtttttcatctcctgtattaaaaggaaataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 acaatgtgtctccgagtggaaagaacaagtttttcatctcctgtattaaaaggaaataga 348
Query: 181 cgacaaatccaattggtcagaagtgccatggatgcttcatttggtgatatggcaaatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cgacaaatccaattggtcagaagtgccatggatgcttcatttggtgatatggcaaatgat 408
Query: 241 tctactgctgtttttccaagaattaatgtgaaggacccatataaacgacttggaataagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tctactgctgtttttccaagaattaatgtgaaggacccatataaacgacttggaataagc 468
Query: 301 aaggaagcttctgaagatgaaattcaagcagcaaggaactttttaattcaacaatatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aaggaagcttctgaagatgaaattcaagcagcaaggaactttttaattcaacaatatgca 528
Query: 361 gggcacaagccaagtatggattcaattgagtcagcgcatgacaaaataatcatgcagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gggcacaagccaagtatggattcaattgagtcagcgcatgacaaaataatcatgcagaag 588
Query: 421 ttctatgaccgtaggaatccaaaaattgactttaagnnnnnnntgagggaagtcaatcaa 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 589 ttctatgaccgtaggaatccaaaaattgactttaagaaaaaaatgagggaagtcaatcaa 648
Query: 481 tctaaatttcttcaggctatcagaggaagatttcagactccatccacaaaattcattata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tctaaatttcttcaggctatcagaggaagatttcagactccatccacaaaattcattata 708
Query: 541 aaaacttcactagtattcttattacttggagttctgacagttctctttccgactgaagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aaaacttcactagtattcttattacttggagttctgacagttctctttccgactgaagaa 768
Query: 601 gggccaacacttcaagtagcgctatctctgatcgctacaatatattttatacatgatcgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gggccaacacttcaagtagcgctatctctgatcgctacaatatattttatacatgatcgt 828
Query: 661 ctgaagagcaagatacgagctttcctttatggggttggagcatttattttttcgtggctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 ctgaagagcaagatacgagctttcctttatggggttggagcatttattttttcgtggctg 888
Query: 721 ttgggaaccttcttgatggtgtcagtgattcctcctattcgagtactttaggga 774
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 889 ttgggaaccttcttgatggtgtcagtgattcctcctattcgagtacttaaggga 942
>gnl|LJGI|AV774311
Length = 431
Score = 194 bits (98), Expect = 6e-49
Identities = 170/185 (91%), Gaps = 8/185 (4%)
Strand = Plus / Plus
Query: 137 tggaaagaacaagtttttcatctcct-gtattaaaagg--aaatagacgacaaatccaat 193
||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 248 tggaaagaacaagttattcatctccttgtattaaaatgtgaaatagacgacaaatccaat 307
Query: 194 tgg-tcagaagtgccatggatgcttcattt-ggtgatatggcaaatgattctactgct-g 250
||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |
Sbjct: 308 tgggtcagaagtgccatggatgcttcattttggtgatatggcaactgattctactgcttg 367
Query: 251 tttttccaagaattaatgtg-aaggacccatataaacgacttggaataagcaaggaagct 309
|||| ||||||||||||||| || |||| ||||||||||||||| |||||||| ||||||
Sbjct: 368 ttttaccaagaattaatgtgcaatgacc-atataaacgacttggcataagcaatgaagct 426
Query: 310 tctga 314
|||||
Sbjct: 427 tctga 431
>gnl|LJGI|BP032136 UniRef100_A7R0J6 Cluster: Chromosome undetermined scaffold_310,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_310, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 320
Score = 65.9 bits (33), Expect = 3e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 722 tgggaaccttcttgatggtgtcagtgattcctcctatt-cgagtactttaggg 773
||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||
Sbjct: 241 tgggaaccttcttgatgatgtcagtgagtcctcctattccgagtacttaaggg 189