Miyakogusa Predicted Gene
- Lj4g3v0998960.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0998960.4 Non Chatacterized Hit- tr|J3LZW8|J3LZW8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,39.02,4e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.48259.4
(462 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC597921 weakly similar to UniRef100_A7QIT9 Cluster: Ch... 327 3e-89
gnl|LJGI|TC71219 similar to UniRef100_A7QIT9 Cluster: Chromosome... 285 1e-76
>gnl|LJGI|DC597921 weakly similar to UniRef100_A7QIT9 Cluster: Chromosome chr2
scaffold_105, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_105, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 574
Score = 327 bits (165), Expect = 3e-89
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 1 atgcaatgcgctggtgcttcacctgccaagagtcagccagtggtgaacccaaaccaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atgcaatgcgctggtgcttcacctgccaagagtcagccagtggtgaacccaaaccaccaa 469
Query: 61 cctactgaacatatgcccaagcatcatggatcatcaaaaccttcttggcttttagctata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cctactgaacatatgcccaagcatcatggatcatcaaaaccttcttggcttttagctata 529
Query: 121 gaaatagtaatgggaactatggtcggttctctctttctggttgct 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gaaatagtaatgggaactatggtcggttctctctttctggttgct 574
>gnl|LJGI|TC71219 similar to UniRef100_A7QIT9 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 988
Score = 285 bits (144), Expect = 1e-76
Identities = 309/364 (84%)
Strand = Plus / Plus
Query: 77 ccaagcatcatggatcatcaaaaccttcttggcttttagctatagaaatagtaatgggaa 136
|||||||||| ||| |||| |||||| |||||||||| ||| |||| |||| | |||||
Sbjct: 54 ccaagcatcaaggaacatcgaaacctgcttggcttttggctctagatatagcgacgggaa 113
Query: 137 ctatggtcggttctctctttctggttgctgttctcgctgctttccagaggtgtaacaaaa 196
| ||||| ||||||||||||||| ||||| || || |||||||||||||||||||| ||
Sbjct: 114 ccatggttggttctctctttctgattgctattgtcactgctttccagaggtgtaactaac 173
Query: 197 aatcagctatcgttattccttggaaaaaatctgcaagccagaaagatcatatgacagttt 256
||||| ||||| | ||||||||||| |||||| ||||| | ||||| | ||| | | |
Sbjct: 174 aatcatctatcatcattccttggaagaaatcttcaagcgacaaagagaacatggccatat 233
Query: 257 atatagaccctgagatgttaaaggatgtgagaaggtatagcagacaagatcttgaagtgg 316
|||||||| | |||||||| |||||||||| |||||||||||||| || || |||||||
Sbjct: 234 atatagactcagagatgttgaaggatgtgatgaggtatagcagacaggagctggaagtgg 293
Query: 317 catgtgaagacttcagcaacataatagggtcctcaccagacagtgtggtctacaagggga 376
| ||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||| |
Sbjct: 294 cttgtgaggacttcagctacataattgggtcctcaccagatagtgtggtctacaagggta 353
Query: 377 ccatgaaaggtgggcctgagattggtgtaatttccctctgcattagggaggagcaatgga 436
| ||||||||||||||||| |||| ||||||||| |||||||| | ||| ||| | ||||
Sbjct: 354 cgatgaaaggtgggcctgaaattgctgtaatttcactctgcatcaaggaagagaattgga 413
Query: 437 cagg 440
||||
Sbjct: 414 cagg 417