Miyakogusa Predicted Gene

Lj4g3v0998950.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0998950.1 Non Chatacterized Hit- tr|K3YVX1|K3YVX1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018417,71.83,3e-19,Ribosomal_L7_L12,Ribosomal protein L7/L12;
ClpS-like,Ribosomal protein L7/L12, C-terminal/adaptor pr,CUFF.48256.1
         (596 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58199 similar to UniRef100_A7PCZ5 Cluster: Chromosome...    66   3e-10

>gnl|LJGI|TC58199 similar to UniRef100_A7PCZ5 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (88%)
          Length = 1087

 Score = 65.9 bits (33), Expect = 3e-10
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                       
Query: 361 gaggagaagaaggctgagaaaacggcttttgatgtgaagcttgatgcgtttgatgcggcg 420
           |||||||| ||||| ||||| || ||||||||||||||||| ||    |||||||| || 
Sbjct: 494 gaggagaaaaaggcagagaagacagcttttgatgtgaagctggagaaatttgatgctgcc 553

                                                                
Query: 421 tcgaagattaaggtgattaaggaagtgaggacgtttactagcttggggttgaa 473
            | ||||| |||||||||||||| || || || ||||||||| |||| |||||
Sbjct: 554 gcaaagatcaaggtgattaaggaggtaagaacatttactagcctgggattgaa 606