Miyakogusa Predicted Gene

Lj4g3v0998890.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0998890.1 Non Chatacterized Hit- tr|A5C710|A5C710_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.61,0.00000000000002,seg,NULL; DUF2351,Ubiquitin-conjugating
enzyme E2C-binding protein,CUFF.48255.1
         (1668 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP055237 weakly similar to UniRef100_A7QE83 Cluster: Ch...   698   0.0  

>gnl|LJGI|BP055237 weakly similar to UniRef100_A7QE83 Cluster: Chromosome chr4
            scaffold_83, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr4 scaffold_83, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (15%)
          Length = 540

 Score =  698 bits (352), Expect = 0.0
 Identities = 366/373 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1296 aaccgatgaatcatcattccggtttgttgttagagatctggcaaccaaatcccctgtcct 1355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540  aaccgatgaatcatcattccggtttgttgttagagatctggcaaccaaatcccctgtcct 481

                                                                        
Query: 1356 gcaaatcattcttttaaatccagatacttggtcctgttctggtaattgttctgttgttga 1415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  gcaaatcattcttttaaatccagatacttggtcctgttctggtaattgttctgttgttga 421

                                                                        
Query: 1416 ggacgaagacccagttcctaaattacagctacggcccatcatcaaggtgcttttttctga 1475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420  ggacgaagacccagttcctaaattacagctacggcccatcatcaaggtgcttttttctga 361

                                                                        
Query: 1476 ttttagagctgcaactgaatctcaattaaggatgatagaagaatgggcaacaaagaattc 1535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360  ttttagagctgcaactgaatctcaattaaggatgatagaagaatgggcaacaaagaattc 301

                                                                        
Query: 1536 agctgaaannnnnnncatgttatctcgtcaaatacaagatttgatggggtcgttgatgac 1595
            ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300  agctgaaatttttttcatgttatctcgtcaaatacaagatttgatggggtcgttgatgac 241

                                                                        
Query: 1596 agcaaaagatatatacccaccttcatatgcttcctatcaaggattaatcttgtcgtctgt 1655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240  agcaaaagatatatacccaccttcatatgcttcctatcaaggattaatcttgtcgtctgt 181

                         
Query: 1656 gcatcagtaggaa 1668
            |||||||||||||
Sbjct: 180  gcatcagtaggaa 168