Miyakogusa Predicted Gene
- Lj4g3v0985590.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0985590.2 tr|G7LDW4|G7LDW4_MEDTR Tm-1^GCR26 protein
OS=Medicago truncatula GN=MTR_8g076950 PE=4 SV=1,83.17,0,FAMILY NOT
NAMED,NULL; UPF0261,Uncharacterised protein family UPF0261;
TIM-br_sig_trns,TIM-barrel si,CUFF.48734.2
(2109 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP042653 weakly similar to UniRef100_A7M6E7 Cluster: Tm... 747 0.0
gnl|LJGI|BP048527 similar to UniRef100_A7QE93 Cluster: Chromosom... 529 e-149
>gnl|LJGI|BP042653 weakly similar to UniRef100_A7M6E7 Cluster: Tm-1^GCR237 protein;
n=1; Solanum lycopersicum|Rep: Tm-1^GCR237 protein -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum),
partial (9%)
Length = 438
Score = 747 bits (377), Expect = 0.0
Identities = 396/401 (98%), Gaps = 1/401 (0%)
Strand = Plus / Plus
Query: 1 atggctcacgaaaaccacacctcaacccttcgcgttctctgcatcggaaccctcgacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 atggctcacgaaaaccacacctcaacccttcgcgttctctgcatcggaaccctcgacacc 97
Query: 61 aagctcgacgagctccgtttcctctccgattccctccgttccaatctccaccgcttcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 aagctcgacgagctccgtttcctctccgattccctccgttccaatctccaccgcttcacc 157
Query: 121 caccactcctcgcccaatctccaactcgtcctcgtcgatgtttccaccggcccaaacgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 158 caccactcctcgcccaatctccaactcgtcctcgtcgatgtttccaccggccccaacgcg 217
Query: 181 ccaccacaacaaccttcaccaaacttcacattcgtttccagaaacgatgtcctctcttgt 240
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ccaacacaaaaaacttcaccaaacttcacattcgtttccagaaacgatgtcctctcttgt 277
Query: 241 cacctctcatcctc-gcatcttcttccagaagacagaggcgaagccgttgctgtcatgag 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cacctctcatcctcggcatcttcttccagaagacagaggcgaagccgttgctgtcatgag 337
Query: 300 ccaagcgctggagaatttcctgaatgaatcatctcacgacatcgccggcgtaatcggcgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ccaagcgctggagaatttcctgaatgaatcatctcacgacatcgccggcgtaatcggcgt 397
Query: 360 cggtggcagcggagggacatcgctgttatcatctccgttca 400
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cggtggcagcggagggacatcgctgttatcatctccgttca 438
>gnl|LJGI|BP048527 similar to UniRef100_A7QE93 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 519
Score = 529 bits (267), Expect = e-149
Identities = 267/267 (100%)
Strand = Plus / Minus
Query: 1843 ggaatgggatatagcttggaagttgagatgattcgaaaagcacataacatgggtctctta 1902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaatgggatatagcttggaagttgagatgattcgaaaagcacataacatgggtctctta 460
Query: 1903 acaaccccatatgcattcaatcaacatgaagcaattgaaatggctaaagctggcgctgat 1962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 acaaccccatatgcattcaatcaacatgaagcaattgaaatggctaaagctggcgctgat 400
Query: 1963 attatagtggcccatatgggtctaacaacaacaggctccataggcgcaaaaacagctgtt 2022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 attatagtggcccatatgggtctaacaacaacaggctccataggcgcaaaaacagctgtt 340
Query: 2023 tcacttgaggaaagtgtcgtgcgtgtacaagctattgcagatgcagcacatagaatcaac 2082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tcacttgaggaaagtgtcgtgcgtgtacaagctattgcagatgcagcacatagaatcaac 280
Query: 2083 cccaatgccattgtgctgtgtcatgga 2109
|||||||||||||||||||||||||||
Sbjct: 279 cccaatgccattgtgctgtgtcatgga 253