Miyakogusa Predicted Gene
- Lj4g3v0975580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0975580.1 Non Chatacterized Hit- tr|A2V887|A2V887_TOBAC
Putative uncharacterized protein RsRG3-11 (Fragment)
O,65.28,1e-18,seg,NULL; PALMITOYL PROTEIN THIOESTERASE-RELATED,NULL;
PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOS,CUFF.48249.1
(717 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67023 weakly similar to UniRef100_A7PUR5 Cluster: Chr... 1096 0.0
gnl|LJGI|BP060326 similar to UniRef100_A7PUR5 Cluster: Chromosom... 557 e-158
gnl|LJGI|GO027805 weakly similar to UniRef100_A7PUR5 Cluster: Ch... 131 7e-30
gnl|LJGI|TC61054 similar to UniRef100_A7PUR5 Cluster: Chromosome... 131 7e-30
>gnl|LJGI|TC67023 weakly similar to UniRef100_A7PUR5 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (77%)
Length = 988
Score = 1096 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Plus
Query: 1 atgacggcaaatacagctgccattttctacaatccatctaacaattttctcgggacaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgacggcaaatacagctgccattttctacaatccatctaacaattttctcgggacaaat 172
Query: 61 ctgcagcataaacatagattgttgaaaaattcttcttcatttgctcgtagattttctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ctgcagcataaacatagattgttgaaaaattcttcttcatttgctcgtagattttctaac 232
Query: 121 tcaagaacactctttcttggcgggtttgttggtgacaaactctgtgcagctaatgcaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tcaagaacactctttcttggcgggtttgttggtgacaaactctgtgcagctaatgcaatg 292
Query: 181 gatgatggattcaaaggagcttgtgctcacagagatgaaaagagtgatggacaagttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gatgatggattcaaaggagcttgtgctcacagagatgaaaagagtgatggacaagttcaa 352
Query: 241 gtggttgaacaagaagctttcattgatgggtcatccgagtttcatcctaagtttttgttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gtggttgaacaagaagctttcattgatgggtcatccgagtttcatcctaagtttttgttc 412
Query: 301 catgagctggagtcaactctcaatcaaatgagcaagtggttagtaactgccatatttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 catgagctggagtcaactctcaatcaaatgagcaagtggttagtaactgccatatttggt 472
Query: 361 gttttcattctttggaggcatgatgcagaagccttatggtttgcagcggggtctttttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gttttcattctttggaggcatgatgcagaagccttatggtttgcagcggggtctttttta 532
Query: 421 aatgcaatgctttctgcttcgctcaaacaaatgctaaatcagaaacggccttctaccctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aatgcaatgctttctgcttcgctcaaacaaatgctaaatcagaaacggccttctaccctg 592
Query: 481 aaatctgaccctgggatgccctcttcccatgctcaatccatcttctttattgtcctgttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aaatctgaccctgggatgccctcttcccatgctcaatccatcttctttattgtcctgttt 652
Query: 541 attattttgtcag 553
|||||||||||||
Sbjct: 653 attattttgtcag 665
Score = 325 bits (164), Expect = 2e-88
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 554 tcatacctgcgggtgtcgcaaaaacttcacacggtgagccaggtgattgttggagctgtt 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tcatacctgcgggtgtcgcaaaaacttcacacggtgagccaggtgattgttggagctgtt 784
Query: 614 acagggtccatttgcgctatcttgtggcaatggctatggaattcttttatgctggatgtt 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 acagggtccatttgcgctatcttgtggcaatggctatggaattcttttatgctggatgtt 844
Query: 674 tttgtatcctcttcgtgggtcagaatcatcgttgttttggggtc 717
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 tttgtatcctcttcgtgggtcagaatcatcgttgttttggggtc 888
>gnl|LJGI|BP060326 similar to UniRef100_A7PUR5 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 479
Score = 557 bits (281), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Minus
Query: 430 ctttctgcttcgctcaaacaaatgctaaatcagaaacggccttctaccctgaaatctgac 489
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 479 ctttctgcttcgctcaaacaaatgctaaatcagaaacgnccttctaccctgaaatctgac 420
Query: 490 cctgggatgccctcttcccatgctcaatccatcttctttattgtcctgtttattattttg 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cctgggatgccctcttcccatgctcaatccatcttctttattgtcctgtttattattttg 360
Query: 550 tcagtcatacctgcgggtgtcgcaaaaacttcacacggtgagccaggtgattgttggagc 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tcagtcatacctgcgggtgtcgcaaaaacttcacacggtgagccaggtgattgttggagc 300
Query: 610 tgttacagggtccatttgcgctatcttgtggcaatggctatggaattcttttatgctgga 669
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 299 tgttacagggtccatttgcgctatcttgtggccatggctatggaattcttttatgctgga 240
Query: 670 tgtttttgtatcctcttcgtgggtcagaatcatcgttgttttggggtc 717
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgtttttgtatcctcttcgtgggtcagaatcatcgttgttttggggtc 192
>gnl|LJGI|GO027805 weakly similar to UniRef100_A7PUR5 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (76%)
Length = 761
Score = 131 bits (66), Expect = 7e-30
Identities = 171/206 (83%)
Strand = Plus / Minus
Query: 329 tgagcaagtggttagtaactgccatatttggtgttttcattctttggaggcatgatgcag 388
||||||||||| ||||| ||||| | |||| || ||| ||||||||||||||||||| ||
Sbjct: 557 tgagcaagtggatagtagctgccctctttgctggtttaattctttggaggcatgatgtag 498
Query: 389 aagccttatggtttgcagcggggtcttttttaaatgcaatgctttctgcttcgctcaaac 448
||||||||||||||| ||| || ||| |||||||||| | ||||| | || ||||||||
Sbjct: 497 aagccttatggtttggagctggatctgttttaaatgctgtactttcagtttggctcaaac 438
Query: 449 aaatgctaaatcagaaacggccttctaccctgaaatctgaccctgggatgccctcttccc 508
|| ||||| ||| ||||||| || ||| | ||||||||||| |||||||| ||||| |
Sbjct: 437 gtatactaaaccaggaacggccctcaaccgtaaaatctgacccagggatgccgtcttcac 378
Query: 509 atgctcaatccatcttctttattgtc 534
| || ||||| || ||||||| ||||
Sbjct: 377 acgcacaatcaatattctttactgtc 352
>gnl|LJGI|TC61054 similar to UniRef100_A7PUR5 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 776
Score = 131 bits (66), Expect = 7e-30
Identities = 171/206 (83%)
Strand = Plus / Plus
Query: 329 tgagcaagtggttagtaactgccatatttggtgttttcattctttggaggcatgatgcag 388
||||||||||| ||||| ||||| | |||| || ||| ||||||||||||||||||| ||
Sbjct: 456 tgagcaagtggatagtagctgccctctttgctggtttaattctttggaggcatgatgtag 515
Query: 389 aagccttatggtttgcagcggggtcttttttaaatgcaatgctttctgcttcgctcaaac 448
||||||||||||||| ||| || ||| |||||||||| | ||||| | || ||||||||
Sbjct: 516 aagccttatggtttggagctggatctgttttaaatgctgtactttcagtttggctcaaac 575
Query: 449 aaatgctaaatcagaaacggccttctaccctgaaatctgaccctgggatgccctcttccc 508
|| ||||| ||| ||||||| || ||| | ||||||||||| |||||||| ||||| |
Sbjct: 576 gtatactaaaccaggaacggccctcaaccgtaaaatctgacccagggatgccgtcttcac 635
Query: 509 atgctcaatccatcttctttattgtc 534
| || ||||| || ||||||| ||||
Sbjct: 636 acgcacaatcaatattctttactgtc 661