Miyakogusa Predicted Gene

Lj4g3v0974400.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0974400.1 tr|A9RES0|A9RES0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65167
,34.18,1e-18,BAH,Bromo adjacent homology (BAH) domain; seg,NULL; Bromo
adjacent homology domain,Bromo adjacent ho,CUFF.48236.1
         (525 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC596088 similar to UniRef100_A7P5F6 Cluster: Chromosom...   708   0.0  
gnl|LJGI|BW598578                                                     367   e-101
gnl|LJGI|FS335092 similar to UniRef100_A7P5F6 Cluster: Chromosom...   161   5e-39

>gnl|LJGI|DC596088 similar to UniRef100_A7P5F6 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 415

 Score =  708 bits (357), Expect = 0.0
 Identities = 363/365 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagaagagagcatcgagttcaagtgggggaagaagcgaggaatcggagggaaaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  atggcagaagagagcatcgagttcaagtgggggaagaagcgaggaatcggagggaaaagg 110

                                                                       
Query: 61  aaggacgtgcagttctacgagtctttcacctacgacggcgtggactacgcgctttacgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aaggacgtgcagttctacgagtctttcacctacgacggcgtggactacgcgctttacgac 170

                                                                       
Query: 121 accgtttacctcgacagtggcggcgagttcgagcctttcgtcggcaagctcatcaagatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 accgtttacctcgacagtggcggcgagttcgagcctttcgtcggcaagctcatcaagatc 230

                                                                       
Query: 181 tttgagaatcgcgacaagtcgaagaaagtgaaggtgcagtggtatttccgtcccggcgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tttgagaatcgcgacaagtcgaagaaagtgaaggtgcagtggtatttccgtcccggcgag 290

                                                                       
Query: 241 attcgcaagttcgtcgaagggatcgagacgcgccacaacgagttgttttttgcgtgtggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 attcgcaagttcgtcgaagggatcgagacgcgccacaacgagttgttttttgcgtgtggt 350

                                                                       
Query: 301 gaaggccttggacttgccaatgtcaatcctctggaagctattgcaggaaaatgcaatgtt 360
           ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 351 gaaagccttggacttgccaatgtcaaccctctggaagctattgcaggaaaatgcaatgtt 410

                
Query: 361 gtttg 365
           |||||
Sbjct: 411 gtttg 415


>gnl|LJGI|BW598578 
          Length = 386

 Score =  367 bits (185), Expect = e-101
 Identities = 207/214 (96%), Gaps = 4/214 (1%)
 Strand = Plus / Plus

                                                                       
Query: 312 acttgccaatgtcaatcctctggaagctattgcaggaaaatgcaatgttgtttgcatttc 371
           |||||||| |||||||||||||    ||||| |||||||||||| |||||||||||||||
Sbjct: 40  acttgccagtgtcaatcctctg----ctattacaggaaaatgcagtgttgtttgcatttc 95

                                                                       
Query: 372 taaagacatcaggaattcacagccatcagatgaagcacttcaaaaggctgattttgtatt 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  taaagacatcaggaattcacagccatcagatgaagcacttcaaaaggctgattttgtatt 155

                                                                       
Query: 432 ccatcgtttctttgatgttgggcagcgcaaaatattggatactatagatgacaagagtgc 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ccatcgtttctttgatgttgggcagcgcaaaatattggatactatagatgacaagagtgc 215

                                             
Query: 492 tggaattgaagtaaaagatatatttaacaaatga 525
           ||||||||||||||||||||||||||||||||||
Sbjct: 216 tggaattgaagtaaaagatatatttaacaaatga 249


>gnl|LJGI|FS335092 similar to UniRef100_A7P5F6 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 752

 Score =  161 bits (81), Expect = 5e-39
 Identities = 150/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 280 gagttgttttttgcgtgtggtgaaggccttggacttgccaatgtcaatcctctggaagct 339
           ||||||||||| || | |||||||||  | || ||||| |||||||||||||||||||||
Sbjct: 558 gagttgtttttggcatctggtgaaggattagggcttgcaaatgtcaatcctctggaagct 617

                                                                       
Query: 340 attgcaggaaaatgcaatgttgtttgcatttctaaagacatcaggaattcacagccatca 399
           ||||| || ||||||| |||||||||||||||||| |||| ||||||| |||||  ||||
Sbjct: 618 attgctggcaaatgcattgttgtttgcatttctaaggacaacaggaatccacagttatca 677

                                                                
Query: 400 gatgaagcacttcaaaaggctgattttgtattccatcgtttctttgatgttgg 452
           ||||||| |||||||| |||||||||||| |||  || || ||||||||||||
Sbjct: 678 gatgaagaacttcaaatggctgattttgttttctctcattgctttgatgttgg 730