Miyakogusa Predicted Gene
- Lj4g3v0961090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0961090.1 Non Chatacterized Hit- tr|I1LHS7|I1LHS7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20104
PE,95.14,0,ARF-like small GTPases; ARF, ADP-ribosylatio,Small GTPase
superfamily, ARF type; Sar1p-like members ,CUFF.48215.1
(558 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB826970 similar to UniRef100_A5CFZ3 Cluster: Small G-p... 345 2e-94
gnl|LJGI|AV417711 homologue to UniRef100_A5CFZ3 Cluster: Small G... 339 1e-92
>gnl|LJGI|CB826970 similar to UniRef100_A5CFZ3 Cluster: Small G-protein; n=1; Hordeum
vulgare subsp. vulgare|Rep: Small G-protein - Hordeum
vulgare var. distichum (Two-rowed barley), partial (68%)
Length = 576
Score = 345 bits (174), Expect = 2e-94
Identities = 189/194 (97%)
Strand = Plus / Plus
Query: 220 cgatcttactggaggaactactttgagcaaacagatggtttggtttgggtagttgacagc 279
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cgatcttactggaggaactactttgagcaaacagatggtttggtttgggtagttgacagt 442
Query: 280 tctgatctcagaaggttggatgactgcaaaatggagctagataaccttctaaaggaagag 339
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tccgatctcagaaggttggatgactgcaaaatggagctagataaccttctaaaggaagag 502
Query: 340 aggctatcaggatcttccttactgatactagcaaataaacaggacattagaggcgcactt 399
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cggctatcaggatcatccttactgatactagcaaataaacaggacattagaggcgcactt 562
Query: 400 acacctgatgagat 413
||||| ||||||||
Sbjct: 563 acaccagatgagat 576
Score = 295 bits (149), Expect = 1e-79
Identities = 170/177 (96%)
Strand = Plus / Plus
Query: 1 atgggtcttcttagcatcattcggaaaatcaaaaggaaagaaaaggaaatgcgaattctt 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 197 atgggtcttctgagcatcattcggaaaatcaaaaggaaagaaaaggaaatgcgaatcctt 256
Query: 61 atggttggattggataattctggcaaaaccactatcgttttgaagattaatggcgaggac 120
|||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 257 atggttgggttggacaattctggcaaaaccacaatcgttttgaagattaatggcgaggac 316
Query: 121 actagtgtcatcagtcccacccttggcttcaacatcaaaaccatctcctaccaaact 177
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 317 actagtgtcatcagtcctacccttggcttcaacatcaacaccatctcctaccaaact 373
>gnl|LJGI|AV417711 homologue to UniRef100_A5CFZ3 Cluster: Small G-protein; n=1;
Hordeum vulgare subsp. vulgare|Rep: Small G-protein -
Hordeum vulgare var. distichum (Two-rowed barley),
partial (31%)
Length = 292
Score = 339 bits (171), Expect = 1e-92
Identities = 177/179 (98%)
Strand = Plus / Plus
Query: 1 atgggtcttcttagcatcattcggaaaatcaaaaggaaagaaaaggaaatgcgaattctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atgggtcttcttagcatcattcggaaaatcaaaaggaaagaaaaggaaatgcgaattctt 173
Query: 61 atggttggattggataattctggcaaaaccactatcgttttgaagattaatggcgaggac 120
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 174 atggttggattggataattctggcaaaaccactatcgttttgaagattaacggggaggac 233
Query: 121 actagtgtcatcagtcccacccttggcttcaacatcaaaaccatctcctaccaaactta 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 actagtgtcatcagtcccacccttggcttcaacatcaaaaccatctcctaccaaactta 292