Miyakogusa Predicted Gene
- Lj4g3v0948900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0948900.1 Non Chatacterized Hit- tr|I1JCQ7|I1JCQ7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.46,0,seg,NULL;
sdhA_forward: succinate dehydrogenase, flavoprotei,Succinate
dehydrogenase, flavoprotein s,CUFF.48211.1
(1683 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58055 homologue to UniRef100_A9TP02 Cluster: Predicte... 2282 0.0
gnl|LJGI|TC75164 similar to UniRef100_A7PUW0 Cluster: Chromosome... 1354 0.0
gnl|LJGI|TC59852 similar to UniRef100_A7PUW0 Cluster: Chromosome... 791 0.0
gnl|LJGI|DN652310 similar to UniRef100_O82663 Cluster: Succinate... 240 2e-62
gnl|LJGI|AV778936 similar to UniRef100_A7PUW0 Cluster: Chromosom... 141 2e-32
>gnl|LJGI|TC58055 homologue to UniRef100_A9TP02 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(55%)
Length = 1245
Score = 2282 bits (1151), Expect = 0.0
Identities = 1151/1151 (100%)
Strand = Plus / Plus
Query: 1 atgtggcggtgcgtggctcgtgctgttcgcggatcatcttcctcagagagatccaatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atgtggcggtgcgtggctcgtgctgttcgcggatcatcttcctcagagagatccaatctt 154
Query: 61 tctcatcaaccacttcgatctcatttttcaagattcttcaccagtggttcttacaatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tctcatcaaccacttcgatctcatttttcaagattcttcaccagtggttcttacaatgtg 214
Query: 121 gtggatcataaatacgacgcgattgttgttggtgctggtggcgcagggttgagagccgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gtggatcataaatacgacgcgattgttgttggtgctggtggcgcagggttgagagccgct 274
Query: 181 attggactctctgaacatggcttcaacactgcgtgcatcaccaagctcttcccgactcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 attggactctctgaacatggcttcaacactgcgtgcatcaccaagctcttcccgactcgt 334
Query: 241 tcacacactgttgcagctcagggtggtataaatgctgcattgggaaatatgactgaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcacacactgttgcagctcagggtggtataaatgctgcattgggaaatatgactgaagat 394
Query: 301 gactggaggtggcacatgtatgacactatcaagggaagtgattggctaggagaccaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gactggaggtggcacatgtatgacactatcaagggaagtgattggctaggagaccaagat 454
Query: 361 gccatccaatatatgtgtagggaggcaccaaaagcagtgattgagcttgaaaattatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gccatccaatatatgtgtagggaggcaccaaaagcagtgattgagcttgaaaattatgga 514
Query: 421 ctgccattttcacgaaccgaggatggaaagatataccagcgtgcatttggtggtcagagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctgccattttcacgaaccgaggatggaaagatataccagcgtgcatttggtggtcagagc 574
Query: 481 ttgaactttggaaaaggtggtcaagcatatcgttgcgcatgtgctgctgatcgtactggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttgaactttggaaaaggtggtcaagcatatcgttgcgcatgtgctgctgatcgtactggg 634
Query: 541 catgctttattgcacactctctatggccaggctatgaagcataatacccagttttttgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 catgctttattgcacactctctatggccaggctatgaagcataatacccagttttttgta 694
Query: 601 gaatattttgcattagatcttttgatgaacagtgaaggtagttgccaaggagtaattgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gaatattttgcattagatcttttgatgaacagtgaaggtagttgccaaggagtaattgcc 754
Query: 661 ttgaatatggaagatggaacattacatcgattccaagcatcttcaaccattttggccact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ttgaatatggaagatggaacattacatcgattccaagcatcttcaaccattttggccact 814
Query: 721 gggggttatggtagagcatacttttctgcaacctcagcacatacatgcactggtgatggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gggggttatggtagagcatacttttctgcaacctcagcacatacatgcactggtgatggc 874
Query: 781 aatgccatggttgctcgtgctgggatcccacttgaggatcaagagtttgtgcaatttcac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 aatgccatggttgctcgtgctgggatcccacttgaggatcaagagtttgtgcaatttcac 934
Query: 841 ccaacaggcatatatggagctggttgccttgtctcagaagggtgtcgcggtgaaggtgga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 ccaacaggcatatatggagctggttgccttgtctcagaagggtgtcgcggtgaaggtgga 994
Query: 901 attcttaggaatagtgagggtgagaggtttatggaaagatatgctcctactgcgaaggat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 attcttaggaatagtgagggtgagaggtttatggaaagatatgctcctactgcgaaggat 1054
Query: 961 cttgcatcacgagatgtagtttctagatcaatgactatggagattcgggaaggtcgtggt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 cttgcatcacgagatgtagtttctagatcaatgactatggagattcgggaaggtcgtggt 1114
Query: 1021 gtaggaaaacataaagatcacatctatcttcacttgaatcacttacctccagatgttctg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 gtaggaaaacataaagatcacatctatcttcacttgaatcacttacctccagatgttctg 1174
Query: 1081 aaggagagactacctggtatatccgaaactgcagctatttttgctggtgtggatgttaca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 aaggagagactacctggtatatccgaaactgcagctatttttgctggtgtggatgttaca 1234
Query: 1141 aaggaacccat 1151
|||||||||||
Sbjct: 1235 aaggaacccat 1245
>gnl|LJGI|TC75164 similar to UniRef100_A7PUW0 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 815
Score = 1354 bits (683), Expect = 0.0
Identities = 686/687 (99%)
Strand = Plus / Plus
Query: 997 atggagattcgggaaggtcgtggtgtaggaaaacataaagatcacatctatcttcacttg 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 atggagattcgggaaggtcgtggtgtaggaaaacataaagatcacatctatcttcacttg 72
Query: 1057 aatcacttacctccagatgttctgaaggagagactacctggtatatccgaaactgcagct 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aatcacttacctccagatgttctgaaggagagactacctggtatatccgaaactgcagct 132
Query: 1117 atttttgctggtgtggatgttacaaaggaacccattcctgtcttgccaacagtgcattat 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atttttgctggtgtggatgttacaaaggaacccattcctgtcttgccaacagtgcattat 192
Query: 1177 aacatgggtggtattcccacaaactatcatggagaggtggttaccattaaaggtgatgat 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aacatgggtggtattcccacaaactatcatggagaggtggttaccattaaaggtgatgat 252
Query: 1237 ccagatgcagtagttcctggattaatggctgctggggaagcagcctgtgcgtcagtgcat 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ccagatgcagtagttcctggattaatggctgctggggaagcagcctgtgcgtcagtgcat 312
Query: 1297 ggttccaataggcttggtgcaaattcacttctggacattgtagtttttggtagagcttgt 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggttccaataggcttggtgcaaattcacttctggacattgtagtttttggtagagcttgt 372
Query: 1357 gcaaatagagttgcagaagttcataagccaggggagaaacaacagcctttggagaaagat 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gcaaatagagttgcagaagttcataagccaggggagaaacaacagcctttggagaaagat 432
Query: 1417 gctggtatgaaaacgattgcttggcttgacaaatttagaaattcgaatgggtctttgcta 1476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 433 gctggtatgaaaacgattgcttggcttgacaaatttagaaattcgaatgggtctttacta 492
Query: 1477 ccttcagaagttcggttgaatatgcaacgtgtaatgcaaaacaatgcttctgttttccgc 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccttcagaagttcggttgaatatgcaacgtgtaatgcaaaacaatgcttctgttttccgc 552
Query: 1537 acagaagaaacattaaaagaaggttgcaaattaattgataaaacatgggagagctttcat 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 acagaagaaacattaaaagaaggttgcaaattaattgataaaacatgggagagctttcat 612
Query: 1597 gatatcaaattgaaggatcggggtttgatatggaacactgacttgattgagactattgag 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gatatcaaattgaaggatcggggtttgatatggaacactgacttgattgagactattgag 672
Query: 1657 ttggaaaatcttttgataaatgcctgc 1683
|||||||||||||||||||||||||||
Sbjct: 673 ttggaaaatcttttgataaatgcctgc 699
>gnl|LJGI|TC59852 similar to UniRef100_A7PUW0 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 823
Score = 791 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Plus
Query: 1285 gcgtcagtgcatggttccaataggcttggtgcaaattcacttctggacattgtagttttt 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcgtcagtgcatggttccaataggcttggtgcaaattcacttctggacattgtagttttt 61
Query: 1345 ggtagagcttgtgcaaatagagttgcagaagttcataagccaggggagaaacaacagcct 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggtagagcttgtgcaaatagagttgcagaagttcataagccaggggagaaacaacagcct 121
Query: 1405 ttggagaaagatgctggtatgaaaacgattgcttggcttgacaaatttagaaattcgaat 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttggagaaagatgctggtatgaaaacgattgcttggcttgacaaatttagaaattcgaat 181
Query: 1465 gggtctttgctaccttcagaagttcggttgaatatgcaacgtgtaatgcaaaacaatgct 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gggtctttgctaccttcagaagttcggttgaatatgcaacgtgtaatgcaaaacaatgct 241
Query: 1525 tctgttttccgcacagaagaaacattaaaagaaggttgcaaattaattgataaaacatgg 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tctgttttccgcacagaagaaacattaaaagaaggttgcaaattaattgataaaacatgg 301
Query: 1585 gagagctttcatgatatcaaattgaaggatcggggtttgatatggaacactgacttgatt 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gagagctttcatgatatcaaattgaaggatcggggtttgatatggaacactgacttgatt 361
Query: 1645 gagactattgagttggaaaatcttttgataaatgcctgc 1683
|||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gagactattgagttggaaaatcttttgataaatgcctgc 400
>gnl|LJGI|DN652310 similar to UniRef100_O82663 Cluster: Succinate dehydrogenase
[ubiquinone] flavoprotein subunit 1 mitochondrial
precursor; n=1;, partial (5%)
Length = 201
Score = 240 bits (121), Expect = 2e-62
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 1332 cattgtagtttttggtagagcttgtgcaaatagagttgcagaagttcataagccagggga 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattgtagtttttggtagagcttgtgcaaatagagttgcagaagttcataagccagggga 60
Query: 1392 gaaacaacagcctttggagaaagatgctggtatgaaaacgattgcttggcttgacaaatt 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaacaacagcctttggagaaagatgctggtatgaaaacgattgcttggcttgacaaatt 120
Query: 1452 t 1452
|
Sbjct: 121 t 121
>gnl|LJGI|AV778936 similar to UniRef100_A7PUW0 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 465
Score = 141 bits (71), Expect = 2e-32
Identities = 77/79 (97%)
Strand = Plus / Minus
Query: 1605 attgaaggatcggggtttgatatggaacactgacttgattgagactattgagttggaaaa 1664
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 465 attgaaggataggggtttgatatggaaccctgacttgattgagactattgagttggaaaa 406
Query: 1665 tcttttgataaatgcctgc 1683
|||||||||||||||||||
Sbjct: 405 tcttttgataaatgcctgc 387