Miyakogusa Predicted Gene

Lj4g3v0938850.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0938850.1 tr|G7LEU4|G7LEU4_MEDTR Receptor protein kinase
PERK1 OS=Medicago truncatula GN=MTR_8g077850 PE=3
SV=,82.95,0,PROTEIN_KINASE_ATP,Protein kinase, ATP binding site;
PROTEIN_KINASE_ST,Serine/threonine-protein kina,CUFF.48191.1
         (1233 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS349020 similar to UniRef100_A7P926 Cluster: Chromosom...    72   9e-12
gnl|LJGI|GO011749 similar to UniRef100_A1IGC6 Cluster: PERK1-lik...    58   1e-07
gnl|LJGI|TC79034 similar to UniRef100_A7PAK3 Cluster: Chromosome...    56   5e-07
gnl|LJGI|DC597341 similar to UniRef100_A7P926 Cluster: Chromosom...    54   2e-06

>gnl|LJGI|FS349020 similar to UniRef100_A7P926 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 532

 Score = 71.9 bits (36), Expect = 9e-12
 Identities = 105/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 658 actaatacacatgtctcaactcgtgtcatgggaacttttggatacctagccccagaatat 717
           ||||| |||||||| || |||||||| |||||||| ||||| ||  | || || || |||
Sbjct: 205 actaacacacatgtttctactcgtgtgatgggaacatttgggtatttggctcctgagtat 146

                                                                       
Query: 718 gcatcaagtggaaaattatcagagaagtctgatgttttctcatttggagtcatgctattg 777
           ||||||||||| ||  || | ||||| ||||||||||||||||||||  | |||||||| 
Sbjct: 145 gcatcaagtggcaagctaactgagaaatctgatgttttctcatttggtattatgctatta 86

                   
Query: 778 gaactcat 785
           || |||||
Sbjct: 85  gagctcat 78



 Score = 61.9 bits (31), Expect = 9e-09
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 413 tgttggtgtatgaatttgtgcctaacgatactttagaacaccaccttcatggaaagggt 471
           |||||||||||||||||||||||||  | ||| | ||  ||||||||||||||||||||
Sbjct: 450 tgttggtgtatgaatttgtgcctaataagactcttgattaccaccttcatggaaagggt 392


>gnl|LJGI|GO011749 similar to UniRef100_A1IGC6 Cluster: PERK1-like protein kinase;
           n=2; Nicotiana tabacum|Rep: PERK1-like protein kinase -
           Nicotiana tabacum (Common tobacco), partial (38%)
          Length = 755

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                       
Query: 685 atgggaacttttggatacctagccccagaatatgcatcaagtggaaaattatcagagaag 744
           |||||||||||||| || || || |||||||||||  | ||||||||| |  |||| || 
Sbjct: 325 atgggaacttttgggtatctggctccagaatatgctgccagtggaaaacttacagacaaa 384

                                        
Query: 745 tctgatgttttctcatttggagtcatgct 773
           || ||||||||||| | ||||||||||||
Sbjct: 385 tcggatgttttctcctatggagtcatgct 413



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 474 gcctactatggattggccaactagaatgagaattgcgctaggatccgcaaaagggctcgc 533
           |||||| ||||||||||| || ||| |  |||||||  | ||||| ||||||||||| ||
Sbjct: 114 gcctaccatggattggcccacgagactacgaattgctttgggatctgcaaaagggcttgc 173

                              
Query: 534 ctaccttcatgaagattgt 552
            || |||||||||||||||
Sbjct: 174 atatcttcatgaagattgt 192


>gnl|LJGI|TC79034 similar to UniRef100_A7PAK3 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 912

 Score = 56.0 bits (28), Expect = 5e-07
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 655 gatactaatacacatgtctcaactcgtgtcatgggaacttttggatacctagccccagaa 714
           ||||| ||||||||| |  |||| ||||| |||||||| ||||| ||| | || ||||||
Sbjct: 441 gatacaaatacacatataacaacacgtgtgatgggaacctttgggtacatggcaccagaa 500

                               
Query: 715 tatgcatcaagtggaaaatt 734
           |||||| ||||||| |||||
Sbjct: 501 tatgcaacaagtgggaaatt 520


>gnl|LJGI|DC597341 similar to UniRef100_A7P926 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 574

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 81/99 (81%)
 Strand = Plus / Plus

                                                                       
Query: 658 actaatacacatgtctcaactcgtgtcatgggaacttttggatacctagccccagaatat 717
           ||||| |||||||| || |||||||| |||||||| ||||| ||  | || || || |||
Sbjct: 476 actaacacacatgtttctactcgtgtgatgggaacatttgggtatttggctcctgagtat 535

                                                  
Query: 718 gcatcaagtggaaaattatcagagaagtctgatgttttc 756
           ||||||||||| ||  || | ||||| ||||||||||||
Sbjct: 536 gcatcaagtggcaagctaactgagaaatctgatgttttc 574