Miyakogusa Predicted Gene
- Lj4g3v0911410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0911410.1 tr|G7LFK4|G7LFK4_MEDTR V-type proton ATPase
subunit H OS=Medicago truncatula GN=MTR_8g078370 PE=4 SV,93.83,0,ARM
repeat,Armadillo-type fold; no description,Armadillo-like helical; no
description,ATPase, V1 com,CUFF.48592.1
(495 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57209 similar to UniRef100_Q94C38 Cluster: AT3g42050/... 981 0.0
gnl|LJGI|TC62875 similar to UniRef100_Q94C38 Cluster: AT3g42050/... 474 e-133
gnl|LJGI|TC66330 similar to UniRef100_Q94C38 Cluster: AT3g42050/... 240 7e-63
>gnl|LJGI|TC57209 similar to UniRef100_Q94C38 Cluster: AT3g42050/F4M19_10; n=1;
Arabidopsis thaliana|Rep: AT3g42050/F4M19_10 -
Arabidopsis thaliana (Mouse-ear cress), partial (98%)
Length = 1769
Score = 981 bits (495), Expect = 0.0
Identities = 495/495 (100%)
Strand = Plus / Plus
Query: 1 atggtggaccttcagcttccacaagttgttcagagtttaaaagcacaagcttggagtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 atggtggaccttcagcttccacaagttgttcagagtttaaaagcacaagcttggagtgat 1067
Query: 61 gaggacttgcttgaggcgctgaattccctggaagaagggcttaaggataacatcaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 gaggacttgcttgaggcgctgaattccctggaagaagggcttaaggataacatcaagaaa 1127
Query: 121 ctaagttcttttgataagtacaagcaagaagttcttcttggcaatctggattggtctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 ctaagttcttttgataagtacaagcaagaagttcttcttggcaatctggattggtctccc 1187
Query: 181 atgcacaaggatctcatattttggcgagaaaatgtcaccaattttgaagagaatgatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 atgcacaaggatctcatattttggcgagaaaatgtcaccaattttgaagagaatgatttc 1247
Query: 241 cagatcgtaagggtcctaataacaattttggactcgtccaatgatccaaggactctggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 cagatcgtaagggtcctaataacaattttggactcgtccaatgatccaaggactctggct 1307
Query: 301 gttgcatgctttgacctttcacagtttgtccagtaccatccatctgggcggattattgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1308 gttgcatgctttgacctttcacagtttgtccagtaccatccatctgggcggattattgtg 1367
Query: 361 gccgacctcaaagccaaggaacgggtgatgaaacttatgaatcatgagagtgctgaggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1368 gccgacctcaaagccaaggaacgggtgatgaaacttatgaatcatgagagtgctgaggtt 1427
Query: 421 actaagaatgcactgctctgcatccaacggcttttcttaggggctaagtatgcaagcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1428 actaagaatgcactgctctgcatccaacggcttttcttaggggctaagtatgcaagcttc 1487
Query: 481 ttgcaggcttagatc 495
|||||||||||||||
Sbjct: 1488 ttgcaggcttagatc 1502
>gnl|LJGI|TC62875 similar to UniRef100_Q94C38 Cluster: AT3g42050/F4M19_10; n=1;
Arabidopsis thaliana|Rep: AT3g42050/F4M19_10 -
Arabidopsis thaliana (Mouse-ear cress), partial (39%)
Length = 860
Score = 474 bits (239), Expect = e-133
Identities = 431/495 (87%)
Strand = Plus / Plus
Query: 1 atggtggaccttcagcttccacaagttgttcagagtttaaaagcacaagcttggagtgat 60
||||| || |||||||| |||||||||||||| || || ||||||||||| |||||||||
Sbjct: 38 atggttgaacttcagctgccacaagttgttcaaagcttgaaagcacaagcatggagtgat 97
Query: 61 gaggacttgcttgaggcgctgaattccctggaagaagggcttaaggataacatcaagaaa 120
||||||||| | ||||| |||||| ||||||||| ||||||||||||||||| ||||||
Sbjct: 98 gaggacttgttggaggcattgaattacctggaagatgggcttaaggataacattaagaaa 157
Query: 121 ctaagttcttttgataagtacaagcaagaagttcttcttggcaatctggattggtctccc 180
|||||||| | ||||||||| ||||||| |||||| |||||| |||| |||||||||||
Sbjct: 158 ctaagttcctatgataagtataagcaaggagttctgcttggccatctcgattggtctcct 217
Query: 181 atgcacaaggatctcatattttggcgagaaaatgtcaccaattttgaagagaatgatttc 240
|||||||| ||| |||||||||||||||||| |||| || |||||||||||||| |||
Sbjct: 218 atgcacaaagattcgatattttggcgagaaaatatcactaactttgaagagaatgacttc 277
Query: 241 cagatcgtaagggtcctaataacaattttggactcgtccaatgatccaaggactctggct 300
||||| |||||||||||||||||||||||||| | |||| |||||||||||||||||||
Sbjct: 278 cagattttaagggtcctaataacaattttggacacttccagtgatccaaggactctggct 337
Query: 301 gttgcatgctttgacctttcacagtttgtccagtaccatccatctgggcggattattgtg 360
||||| |||||||| ||||| ||||| |||||| ||||||| ||||||| | ||||||
Sbjct: 338 gttgcttgctttgatctttctcagttcgtccagcaccatcctgctgggcgtttcattgtg 397
Query: 361 gccgacctcaaagccaaggaacgggtgatgaaacttatgaatcatgagagtgctgaggtt 420
| ||||| ||||||||||||||||| |||||| | ||||||||||||| |||||| ||
Sbjct: 398 actgaccttaaagccaaggaacgggtaatgaaattaatgaatcatgagaatgctgaagta 457
Query: 421 actaagaatgcactgctctgcatccaacggcttttcttaggggctaagtatgcaagcttc 480
||||| ||||| || |||||||||||||||||||||||||| | |||||||| ||||||
Sbjct: 458 actaaaaatgcgcttctctgcatccaacggcttttcttaggttcaaagtatgccagcttc 517
Query: 481 ttgcaggcttagatc 495
| ||||| ||||||
Sbjct: 518 ctacaggcctagatc 532
>gnl|LJGI|TC66330 similar to UniRef100_Q94C38 Cluster: AT3g42050/F4M19_10; n=1;
Arabidopsis thaliana|Rep: AT3g42050/F4M19_10 -
Arabidopsis thaliana (Mouse-ear cress), partial (82%)
Length = 1202
Score = 240 bits (121), Expect = 7e-63
Identities = 214/245 (87%)
Strand = Plus / Plus
Query: 1 atggtggaccttcagcttccacaagttgttcagagtttaaaagcacaagcttggagtgat 60
||||| || |||||||| |||||||||||||| || || ||||||||||| |||||||||
Sbjct: 956 atggttgaacttcagctgccacaagttgttcaaagcttgaaagcacaagcatggagtgat 1015
Query: 61 gaggacttgcttgaggcgctgaattccctggaagaagggcttaaggataacatcaagaaa 120
||||||||| | ||||| |||||| ||||||||| ||||||||||||||||| ||||||
Sbjct: 1016 gaggacttgttggaggcattgaattacctggaagatgggcttaaggataacattaagaaa 1075
Query: 121 ctaagttcttttgataagtacaagcaagaagttcttcttggcaatctggattggtctccc 180
|||||||| | ||||||||| ||| ||| |||||| |||||| |||| |||||||||||
Sbjct: 1076 ctaagttcctatgataagtataagtaaggagttctgcttggccatctcgattggtctcct 1135
Query: 181 atgcacaaggatctcatattttggcgagaaaatgtcaccaattttgaagagaatgatttc 240
|||||||| ||| |||||||||||||||||| |||| || |||||||||||||| |||
Sbjct: 1136 atgcacaaagattcgatattttggcgagaaaatatcactaactttgaagagaatgacttc 1195
Query: 241 cagat 245
|||||
Sbjct: 1196 cagat 1200