Miyakogusa Predicted Gene
- Lj4g3v0911400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0911400.1 Non Chatacterized Hit- tr|I1JCT8|I1JCT8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40647 PE,88.24,0,no
description,Zinc finger, LIM-type; seg,NULL; DUF3633,Protein of
unknown function DUF3633; LIM,Zin,CUFF.48585.1
(1074 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63537 similar to UniRef100_A7PV25 Cluster: Chromosome... 1310 0.0
gnl|LJGI|TC71226 321 5e-87
gnl|LJGI|TC58401 similar to UniRef100_A7NTJ6 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|TC63537 similar to UniRef100_A7PV25 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 1435
Score = 1310 bits (661), Expect = 0.0
Identities = 673/677 (99%)
Strand = Plus / Plus
Query: 147 gaactttatcccaccaaattcagctggcctcattgagtatagagcacatcctttctggac 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaactttatcccaccaaattcagctggcctcattgagtatagagcacatcctttctggac 60
Query: 207 acaaaaatattgtccctcgcatgaacgtgatgggactcctcgatgttgtagctgtcaaag 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaaaaatattgtccctcgcatgaacgtgatgggactcctcgatgttgtagctgtcaaag 120
Query: 267 aatggagtcaagggacacaaaatatctattgcttgatgatggtcgcaagctgtgcctaga 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatggagtcaagggacacaaaatatctattgcttgatgatggtcgcaagctgtgcctaga 180
Query: 327 gtgtctagactcagctattatggatactcatgaatgccaacctctctatcttgaactaca 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgtctagactcagctattatggatactcatgaatgccaacctctctatcttgaactaca 240
Query: 387 agatttctatgaaggtttgaatatgaaaatagagcagcaagttcctatgcttttggtcga 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatttctatgaaggtttgaatatgaaaatagagcagcaagttcctatgcttttggtcga 300
Query: 447 gagacaagcactgaatgaagccatggaaggagaaaagaatggtcatcaccacttacctga 506
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagacaagcactgaatgaggccatggaaggagaaaagaatggtcatcaccacttacctga 360
Query: 507 aactagaggactttgcttatcagaagagcacactatctccactattttaaggagaccaag 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aactagaggactttgcttatcagaagagcacactatctccactattttaaggagaccaag 420
Query: 567 gataggagcaggttatcagatcatagatatgataactgacccttttaggctgatccgtcg 626
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 421 gataggagcaggttatcagatcatagatatgataacggaaccttttaggctgatccgtcg 480
Query: 627 cagtgaagtaacagccatacttgttttgtatggccttccaaggttattgacaggattaat 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagtgaagtaacagccatacttgttttgtatggccttccaaggttattgacaggattaat 540
Query: 687 cctgactcacgaaatgatgcatgcttggcttaggcttaaaggttatggcaatctgagtcc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctgactcacgaaatgatgcatgcttggcttaggcttaaaggttatggcaatctgagtcc 600
Query: 747 tgaagttgaagaaggaatttgccaagtcttggctcatatgtggctagattcagaaatata 806
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgaagttgaagaagggatttgccaagtcttggctcatatgtggctagattcagaaatata 660
Query: 807 ttctgtctctggaactg 823
|||||||||||||||||
Sbjct: 661 ttctgtctctggaactg 677
Score = 357 bits (180), Expect = 9e-98
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 895 aagaagggcaaacggtccgactttgagaagaaacttggtgagttttttaaacaccagatt 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aagaagggcaaacggtccgactttgagaagaaacttggtgagttttttaaacaccagatt 811
Query: 955 gagacagatagctcatcagcttatggagatggatttagaatgggtaaccaggctgtgctc 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gagacagatagctcatcagcttatggagatggatttagaatgggtaaccaggctgtgctc 871
Query: 1015 aagtatggacttagaaggacccttgaccatatccgaatgactggaacttttccataatga 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 aagtatggacttagaaggacccttgaccatatccgaatgactggaacttttccataatga 931
>gnl|LJGI|TC71226
Length = 892
Score = 321 bits (162), Expect = 5e-87
Identities = 321/374 (85%)
Strand = Plus / Plus
Query: 427 gttcctatgcttttggtcgagagacaagcactgaatgaagccatggaaggagaaaagaat 486
||||||||||||||||| ||||| |||||||||||||| || ||||| ||||||||||||
Sbjct: 5 gttcctatgcttttggttgagaggcaagcactgaatgaggcaatggagggagaaaagaat 64
Query: 487 ggtcatcaccacttacctgaaactagaggactttgcttatcagaagagcacactatctcc 546
|||||||||||||||||||||||||||||||| ||||| || |||||||| ||| || ||
Sbjct: 65 ggtcatcaccacttacctgaaactagaggactctgcttgtcggaagagcaaactgtcacc 124
Query: 547 actattttaaggagaccaaggataggagcaggttatcagatcatagatatgataactgac 606
|| ||||||||||||||||| || |||||||| || || | |||| |||||||||||
Sbjct: 125 accattttaaggagaccaagtatcggagcagggtaccaaactgtagacatgataactgag 184
Query: 607 ccttttaggctgatccgtcgcagtgaagtaacagccatacttgttttgtatggccttcca 666
|| ||| ||| |||| | ||||||| ||||| || ||||||||||| ||||||||
Sbjct: 185 ccacatagattgacgcgtcactgtgaagtgacagctattcttgttttgtacggccttcct 244
Query: 667 aggttattgacaggattaatcctgactcacgaaatgatgcatgcttggcttaggcttaaa 726
|| ||| ||||||||| |||||| |||| || ||||||||||| ||||| |||||||||
Sbjct: 245 agattactgacaggatcaatcctagctcatgagatgatgcatgcatggctcaggcttaaa 304
Query: 727 ggttatggcaatctgagtcctgaagttgaagaaggaatttgccaagtcttggctcatatg 786
|||||| ||| |||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 305 ggttatcccaacctgagtccagaagttgaagaaggaatctgccaagtcttagctcatatg 364
Query: 787 tggctagattcaga 800
||| |||| |||||
Sbjct: 365 tggttagagtcaga 378
Score = 186 bits (94), Expect = 2e-46
Identities = 154/174 (88%)
Strand = Plus / Plus
Query: 895 aagaagggcaaacggtccgactttgagaagaaacttggtgagttttttaaacaccagatt 954
|||||||| ||||| || || ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 455 aagaagggtaaacgatctgattttgaaaagaaatttggtgagttttttaaacaccagatt 514
Query: 955 gagacagatagctcatcagcttatggagatggatttagaatgggtaaccaggctgtgctc 1014
||| | |||| ||| |||||||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 515 gagtcggatacctcgtcagcttatggagatggattcagattgggtaaccaggcagtgctc 574
Query: 1015 aagtatggacttagaaggacccttgaccatatccgaatgactggaacttttcca 1068
|||||||| || | |||||||||||||||||||| ||||| |||| |||||||
Sbjct: 575 aagtatgggctcaaaaggacccttgaccatatcctgatgacaggaagttttcca 628
>gnl|LJGI|TC58401 similar to UniRef100_A7NTJ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 784
Score = 58.0 bits (29), Expect = 1e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 11 tctggcatccagaatgtttctgttgccatgcttgcaatctgccaatcactgatcatgagt 70
|||||||||| ||||| ||| | |||| ||||||||| || |||||||||||| ||||||
Sbjct: 589 tctggcatcctgaatgcttccgctgccgtgcttgcaacctaccaatcactgattatgagt 648
Query: 71 t 71
|
Sbjct: 649 t 649