Miyakogusa Predicted Gene

Lj4g3v0880220.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0880220.1 Non Chatacterized Hit- tr|K4CRE9|K4CRE9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.85,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF588,Uncharacterised protein family UPF0497, tran,CUFF.48154.1
         (462 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59834 similar to UniRef100_A7R353 Cluster: Chromosome...   900   0.0  
gnl|LJGI|GO007891 similar to UniRef100_A7P967 Cluster: Chromosom...    52   3e-06

>gnl|LJGI|TC59834 similar to UniRef100_A7R353 Cluster: Chromosome undetermined
           scaffold_484, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_484,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           complete
          Length = 755

 Score =  900 bits (454), Expect = 0.0
 Identities = 460/462 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgaattgccaggggcgtttggtacaagcgccagcttcgctctccgattggggcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atggacgaattgccaggggcgtttggtacaagcgccagcttcgctctccgattggggcaa 213

                                                                       
Query: 61  accgttttttcctccgcttcccttctcttcatgtgcttgggcgttgatttctacggctac 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 accgttttttcctccgcctcccttctcttcatgtgcttgggcgttgatttctacggctac 273

                                                                       
Query: 121 actgctttctgctttttggtgacagttatgggtttggtaatttcctggagcataactctg 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 274 actgctttctgctttttggtgacagtcatgggtttggtaatttcctggagcataactctg 333

                                                                       
Query: 181 ctggtcgtagacgcatattccgtctttataaaatgcttaccacatcaacgaaaactcata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctggtcgtagacgcatattccgtctttataaaatgcttaccacatcaacgaaaactcata 393

                                                                       
Query: 241 ttgatcgtctttctgggagacatggttctgtcatatctctcactagcggcagcttgttca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttgatcgtctttctgggagacatggttctgtcatatctctcactagcggcagcttgttca 453

                                                                       
Query: 301 acggccagtgtcacagatcttttgcttgatgctgacgcttcgtattgcccggcgaagtta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 acggccagtgtcacagatcttttgcttgatgctgacgcttcgtattgcccggcgaagtta 513

                                                                       
Query: 361 tgtggtagatatcagttatctgctgctatggccttcttggcttggtttctttcatcagct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgtggtagatatcagttatctgctgctatggccttcttggcttggtttctttcatcagct 573

                                                     
Query: 421 tcctgtctgtttaacttttggcttttgccttctctgtaaaat 462
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tcctgtctgtttaacttttggcttttgccttctctgtaaaat 615


>gnl|LJGI|GO007891 similar to UniRef100_A7P967 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 737

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 66/78 (84%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                       
Query: 82  cttctcttcatgtgcttgggcgttgatttctacggctacactgctttctgctttttggtg 141
           ||||| |||||||  ||||| ||||| |||||| |||||||  | ||||||||| |||| 
Sbjct: 656 cttcttttcatgtctttgggagttgaattctacagctacacatccttctgctttctggt- 714

                             
Query: 142 acagttatgggtttggta 159
           ||| ||||||||||||||
Sbjct: 715 acaattatgggtttggta 732