Miyakogusa Predicted Gene
- Lj4g3v0880220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0880220.1 Non Chatacterized Hit- tr|K4CRE9|K4CRE9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.85,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF588,Uncharacterised protein family UPF0497, tran,CUFF.48154.1
(462 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59834 similar to UniRef100_A7R353 Cluster: Chromosome... 900 0.0
gnl|LJGI|GO007891 similar to UniRef100_A7P967 Cluster: Chromosom... 52 3e-06
>gnl|LJGI|TC59834 similar to UniRef100_A7R353 Cluster: Chromosome undetermined
scaffold_484, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_484,
whole genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 755
Score = 900 bits (454), Expect = 0.0
Identities = 460/462 (99%)
Strand = Plus / Plus
Query: 1 atggacgaattgccaggggcgtttggtacaagcgccagcttcgctctccgattggggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atggacgaattgccaggggcgtttggtacaagcgccagcttcgctctccgattggggcaa 213
Query: 61 accgttttttcctccgcttcccttctcttcatgtgcttgggcgttgatttctacggctac 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 accgttttttcctccgcctcccttctcttcatgtgcttgggcgttgatttctacggctac 273
Query: 121 actgctttctgctttttggtgacagttatgggtttggtaatttcctggagcataactctg 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 274 actgctttctgctttttggtgacagtcatgggtttggtaatttcctggagcataactctg 333
Query: 181 ctggtcgtagacgcatattccgtctttataaaatgcttaccacatcaacgaaaactcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctggtcgtagacgcatattccgtctttataaaatgcttaccacatcaacgaaaactcata 393
Query: 241 ttgatcgtctttctgggagacatggttctgtcatatctctcactagcggcagcttgttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttgatcgtctttctgggagacatggttctgtcatatctctcactagcggcagcttgttca 453
Query: 301 acggccagtgtcacagatcttttgcttgatgctgacgcttcgtattgcccggcgaagtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 acggccagtgtcacagatcttttgcttgatgctgacgcttcgtattgcccggcgaagtta 513
Query: 361 tgtggtagatatcagttatctgctgctatggccttcttggcttggtttctttcatcagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgtggtagatatcagttatctgctgctatggccttcttggcttggtttctttcatcagct 573
Query: 421 tcctgtctgtttaacttttggcttttgccttctctgtaaaat 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tcctgtctgtttaacttttggcttttgccttctctgtaaaat 615
>gnl|LJGI|GO007891 similar to UniRef100_A7P967 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 737
Score = 52.0 bits (26), Expect = 3e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 82 cttctcttcatgtgcttgggcgttgatttctacggctacactgctttctgctttttggtg 141
||||| ||||||| ||||| ||||| |||||| ||||||| | ||||||||| ||||
Sbjct: 656 cttcttttcatgtctttgggagttgaattctacagctacacatccttctgctttctggt- 714
Query: 142 acagttatgggtttggta 159
||| ||||||||||||||
Sbjct: 715 acaattatgggtttggta 732