Miyakogusa Predicted Gene
- Lj4g3v0878910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0878910.1 Non Chatacterized Hit- tr|D7U5P0|D7U5P0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.25,1e-18,ZF_RING_2,Zinc finger, RING-type; Ring finger,Zinc
finger, RING-type; no description,Zinc finger,
RI,NODE_45191_length_2446_cov_31.854048.path2.1
(1204 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP042964 similar to UniRef100_Q0J122 Cluster: Os09g0468... 1126 0.0
>gnl|LJGI|BP042964 similar to UniRef100_Q0J122 Cluster: Os09g0468800 protein; n=2;
Oryza sativa Japonica Group|Rep: Os09g0468800 protein -
Oryza sativa subsp. japonica (Rice), partial (14%)
Length = 575
Score = 1126 bits (568), Expect = 0.0
Identities = 575/576 (99%), Gaps = 1/576 (0%)
Strand = Plus / Plus
Query: 132 ggcagtaaacttcagcccaccaatcatagcaatggtggtcgtcgtcgccgccgccttcgt 191
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcagtaaacttcagcc-accaatcatagcaatggtggtcgtcgtcgccgccgccttcgt 59
Query: 192 catcgtcacctactgccgcctcatagcccgccacctcaaacccccactcaaacgcctcat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 catcgtcacctactgccgcctcatagcccgccacctcaaacccccactcaaacgcctcat 119
Query: 252 ccgccgcttcaaccgccgcagattcctcccctcctccgccggcgacgtcgactccctcca 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ccgccgcttcaaccgccgcagattcctcccctcctccgccggcgacgtcgactccctcca 179
Query: 312 atacgactcaaccaccctcgacggcccgcaccttttctccccctacggcctcgacgagtc 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atacgactcaaccaccctcgacggcccgcaccttttctccccctacggcctcgacgagtc 239
Query: 372 agtcatcaagaccatccccttctccctctacacccccaaactacacatcgaagagtctcg 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 agtcatcaagaccatccccttctccctctacacccccaaactacacatcgaagagtctcg 299
Query: 432 ccgcagcgactgcgccgtttgcctcctcgatttcgaacaccaagactacgttcgcactct 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccgcagcgactgcgccgtttgcctcctcgatttcgaacaccaagactacgttcgcactct 359
Query: 492 cccaatttgctctcacaccttccatctcgattgcatcgacgcttggcttcgttctcacgc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cccaatttgctctcacaccttccatctcgattgcatcgacgcttggcttcgttctcacgc 419
Query: 552 taactgccctctctgccgcgccggcgtgctctgttctgaatcacccttcacacctctcat 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 taactgccctctctgccgcgccggcgtgctctgttctgaatcacccttcacacctctcat 479
Query: 612 ggcggccaggatccgacccgacctcgacgaccacgctattctccacttcgacccgacccg 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggcggccaggatccgacccgacctcgacgaccacgctattctccacttcgacccgacccg 539
Query: 672 atcagacctcgaagcttattccctctctcccttacc 707
||||||||||||||||||||||||||||||||||||
Sbjct: 540 atcagacctcgaagcttattccctctctcccttacc 575