Miyakogusa Predicted Gene

Lj4g3v0877830.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0877830.2 Non Chatacterized Hit- tr|I1LNP6|I1LNP6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,80.42,0,SNF2_N,SNF2-related; Helicase_C,Helicase, C-terminal;
HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,,CUFF.48145.2
         (1155 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BU494199 homologue to UniRef100_A7PSP4 Cluster: Chromos...   460   e-129

>gnl|LJGI|BU494199 homologue to UniRef100_A7PSP4 Cluster: Chromosome chr6 scaffold_28,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_28, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (11%)
          Length = 556

 Score =  460 bits (232), Expect = e-129
 Identities = 395/448 (88%), Gaps = 1/448 (0%)
 Strand = Plus / Plus

                                                                        
Query: 703  gaactgtttcctgctggctctgatgccaatttagaacttgggaatctccgtcactctcca 762
            ||||||||||||||||||||||||| || ||  ||||||   || |||| |||||| |||
Sbjct: 29   gaactgtttcctgctggctctgatgtcatttcggaacttcacaaactccatcactcccca 88

                                                                        
Query: 763  aaattagatgctctttttgaaattcttaaaaagtctggaattggagttgatgcttcaggt 822
            |||||||  ||||||  ||| |||||| || ||| |||||||||||||||||||||||||
Sbjct: 89   aaattagtcgctcttcatgagattcttgaagagtgtggaattggagttgatgcttcaggt 148

                                                                        
Query: 823  tctgaggctgctgttagcgttgggcagcataaggtcttgatatttgctcaacacaaggct 882
            ||||||| | | || ||| |||||||||| | ||||||||||||||||||||| ||||||
Sbjct: 149  tctgagggtacagtcagcattgggcagcacagggtcttgatatttgctcaacataaggct 208

                                                                        
Query: 883  tttctagatataattgaaaaatgtttgtttcagacgcacatgaagaatgtcaaatatttg 942
            || || ||||||||||||| |  |||||||||||| |||||||||||||||| |||||||
Sbjct: 209  ttccttgatataattgaaagagatttgtttcagacacacatgaagaatgtcacatatttg 268

                                                                        
Query: 943  aggctggatggatcaaatgagccagaaacgcattttaaaatcgtccaagatttcaattca 1002
            |||||||||||||||  ||||||||||| || |||| |||||||| ||| ||||||||||
Sbjct: 269  aggctggatggatcagttgagccagaaaagcgttttgaaatcgtcaaagctttcaattca 328

                                                                        
Query: 1003 gaccctaacattaatgtcttgctgcttacaacacatgtcggggaatttggtctgaacctg 1062
            ||||||| |||| | ||||||||||||||||||||||| ||||   ||||||||||| ||
Sbjct: 329  gaccctaccattgacgtcttgctgcttacaacacatgttggggggcttggtctgaacttg 388

                                                                        
Query: 1063 acatctgcagacacccttg-tttttgtggagcatgaccggaatcctatgcgtgatcatca 1121
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 389  acatctgcagacacccttgttttttgtggagcatgactggaatcctatgcgtgatcatca 448

                                        
Query: 1122 ggctatggggaaagcacacaggcttggc 1149
            ||||||||  | ||||||||||||||||
Sbjct: 449  ggctatggatagagcacacaggcttggc 476