Miyakogusa Predicted Gene

Lj4g3v0866420.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0866420.1 Non Chatacterized Hit- tr|K4BCH0|K4BCH0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,66.67,3e-16,
,CUFF.48122.1
         (193 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70189 similar to UniRef100_A7R4E4 Cluster: Chromosome...   283   2e-76

>gnl|LJGI|TC70189 similar to UniRef100_A7R4E4 Cluster: Chromosome undetermined
           scaffold_670, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_670,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (14%)
          Length = 958

 Score =  283 bits (143), Expect = 2e-76
 Identities = 181/193 (93%), Gaps = 3/193 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagaatggccggcgcaatggaaaaggtagctttgtaaggcttgaagttgtcacagct 60
           ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atggagaatggtcggcgcgatggaaaaggtagctttgtaaggcttgaagttgtcacagct 363

                                                                       
Query: 61  tcattaggatttctgactaattttgagggtgtgtataaattgtgggcttttgtggcaaag 120
           ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 364 tcattgggatttctgactaattttgaggatgtgtataaattgtgggcttttgtggcaaag 423

                                                                       
Query: 121 tttctcaacccagcatttatcagagaaggtggcggtggtcttcctactgttcaagagggc 180
           |||||||||||||||||| | |||||||||   |||||||||||||||||| |||| | |
Sbjct: 424 tttctcaacccagcatttgtgagagaaggt---ggtggtcttcctactgttgaagaagac 480

                        
Query: 181 tctgagacatgag 193
           |||||||||||||
Sbjct: 481 tctgagacatgag 493