Miyakogusa Predicted Gene
- Lj4g3v0818970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0818970.1 Non Chatacterized Hit- tr|I1K265|I1K265_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.372
PE=4,83.21,0,UPF0034,tRNA-dihydrouridine synthase, conserved site;
FMN-linked oxidoreductases,NULL; no descriptio,CUFF.48089.1
(1245 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63821 similar to UniRef100_A7PLF5 Cluster: Chromosome... 2454 0.0
gnl|LJGI|TC75480 similar to UniRef100_A7PLF5 Cluster: Chromosome... 1217 0.0
>gnl|LJGI|TC63821 similar to UniRef100_A7PLF5 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1654
Score = 2454 bits (1238), Expect = 0.0
Identities = 1245/1246 (99%), Gaps = 1/1246 (0%)
Strand = Plus / Plus
Query: 1 atgaaacccgaacccaaacccttctctctcctctccatcatccacaaccgcaaccattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 atgaaacccgaacccaaacccttctctctcctctccatcatccacaaccgcaaccattct 100
Query: 61 catctcgccgcaaaacctcatcctctaatggcccaaaccccaccatctccgg-atccaaa 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 101 catctcgccgcaaaacctcatcctctaatggcccaaaccccaccatctccgggatccaaa 160
Query: 120 ctcgccccaacaaaccgacaacgacgaccaccaacaaccacccttttcaccgcccagaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ctcgccccaacaaaccgacaacgacgaccaccaacaaccacccttttcaccgcccagaaa 220
Query: 180 cctcgccggagaaacccaggtggagcgcgcgtgggctcactggaccaaattgggccgacc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cctcgccggagaaacccaggtggagcgcgcgtgggctcactggaccaaattgggccgacc 280
Query: 240 caagtttctagttgcccccatggttgacaattcggagctaccgtttcgaatgctgtgtcg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 caagtttctagttgcccccatggttgacaattcggagctaccgtttcgaatgctgtgtcg 340
Query: 300 caagtatggtgctgagggtgcatacacccctatgctgcactcgcggatattcaccgagac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 caagtatggtgctgagggtgcatacacccctatgctgcactcgcggatattcaccgagac 400
Query: 360 tgagaagtacaggaaggaagagttcacaacttgcaaggaggatcgaccactgtttgttca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tgagaagtacaggaaggaagagttcacaacttgcaaggaggatcgaccactgtttgttca 460
Query: 420 attctgtgctaatgacccagatgtgttgttggaagctgcacgcaaggtggagccttattg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 attctgtgctaatgacccagatgtgttgttggaagctgcacgcaaggtggagccttattg 520
Query: 480 cgattatgttgatattaatcttgggtgtcctcagcgcattgctaaacgaggatattatgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 cgattatgttgatattaatcttgggtgtcctcagcgcattgctaaacgaggatattatgg 580
Query: 540 agccttcttgatggataaccttcctcttgtgaaatctctcgtggaaaatttggctctcaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 agccttcttgatggataaccttcctcttgtgaaatctctcgtggaaaatttggctctcaa 640
Query: 600 cctgcaagttcctgtttcgtgcaagattaggctctttccgaatttagaggacactttgaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cctgcaagttcctgtttcgtgcaagattaggctctttccgaatttagaggacactttgaa 700
Query: 660 gtatgctaggatgcttgaggaggcgggttgttttcttttagctgttcatgggaggacaag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gtatgctaggatgcttgaggaggcgggttgttttcttttagctgttcatgggaggacaag 760
Query: 720 ggatgagaaggatgggaagaaatttcgagctgactggaaagccatcaaggctgtgaagga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 ggatgagaaggatgggaagaaatttcgagctgactggaaagccatcaaggctgtgaagga 820
Query: 780 tgcagttagaatcccagtcctcgcgaatgggaacataaggcacgtggatgatgttagaga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tgcagttagaatcccagtcctcgcgaatgggaacataaggcacgtggatgatgttagaga 880
Query: 840 ctgtttggaagagaccggtgtcgaaggtgtgctctctgctgagactctgcttgaaaaccc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ctgtttggaagagaccggtgtcgaaggtgtgctctctgctgagactctgcttgaaaaccc 940
Query: 900 agcactctttgctggatttcgaactgctgaatgggtgtccggcagcgaaggaaccattgt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 agcactctttgctggatttcgaactgctgaatgggtgtccggcagcgaaggaaccattgt 1000
Query: 960 ggatagtgaaggaaccattgtggatggaaggctggatcaggcagatctagtgatagagta 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 ggatagtgaaggaaccattgtggatggaaggctggatcaggcagatctagtgatagagta 1060
Query: 1020 tttgaaactttgtgaaaagtaccctgtgccatggagaatgattcgctctcatgttcataa 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 tttgaaactttgtgaaaagtaccctgtgccatggagaatgattcgctctcatgttcataa 1120
Query: 1080 aatgttgggagactggttcagccttcagcctcacatcagggaggagcttaaccaacaatc 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 aatgttgggagactggttcagccttcagcctcacatcagggaggagcttaaccaacaatc 1180
Query: 1140 taaactgacattcgagtttctttatgacatggtggatcggcttagggctacaggtacaag 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 taaactgacattcgagtttctttatgacatggtggatcggcttagggctacaggtacaag 1240
Query: 1200 aatcccactttatctcaaagatgaccgggtggaaacgctaaagtag 1245
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 aatcccactttatctcaaagatgaccgggtggaaacgctaaagtag 1286
>gnl|LJGI|TC75480 similar to UniRef100_A7PLF5 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 702
Score = 1217 bits (614), Expect = 0.0
Identities = 614/614 (100%)
Strand = Plus / Plus
Query: 1 atgaaacccgaacccaaacccttctctctcctctccatcatccacaaccgcaaccattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atgaaacccgaacccaaacccttctctctcctctccatcatccacaaccgcaaccattct 148
Query: 61 catctcgccgcaaaacctcatcctctaatggcccaaaccccaccatctccggatccaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 catctcgccgcaaaacctcatcctctaatggcccaaaccccaccatctccggatccaaac 208
Query: 121 tcgccccaacaaaccgacaacgacgaccaccaacaaccacccttttcaccgcccagaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcgccccaacaaaccgacaacgacgaccaccaacaaccacccttttcaccgcccagaaac 268
Query: 181 ctcgccggagaaacccaggtggagcgcgcgtgggctcactggaccaaattgggccgaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctcgccggagaaacccaggtggagcgcgcgtgggctcactggaccaaattgggccgaccc 328
Query: 241 aagtttctagttgcccccatggttgacaattcggagctaccgtttcgaatgctgtgtcgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aagtttctagttgcccccatggttgacaattcggagctaccgtttcgaatgctgtgtcgc 388
Query: 301 aagtatggtgctgagggtgcatacacccctatgctgcactcgcggatattcaccgagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aagtatggtgctgagggtgcatacacccctatgctgcactcgcggatattcaccgagact 448
Query: 361 gagaagtacaggaaggaagagttcacaacttgcaaggaggatcgaccactgtttgttcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gagaagtacaggaaggaagagttcacaacttgcaaggaggatcgaccactgtttgttcaa 508
Query: 421 ttctgtgctaatgacccagatgtgttgttggaagctgcacgcaaggtggagccttattgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttctgtgctaatgacccagatgtgttgttggaagctgcacgcaaggtggagccttattgc 568
Query: 481 gattatgttgatattaatcttgggtgtcctcagcgcattgctaaacgaggatattatgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gattatgttgatattaatcttgggtgtcctcagcgcattgctaaacgaggatattatgga 628
Query: 541 gccttcttgatggataaccttcctcttgtgaaatctctcgtggaaaatttggctctcaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gccttcttgatggataaccttcctcttgtgaaatctctcgtggaaaatttggctctcaac 688
Query: 601 ctgcaagttcctgt 614
||||||||||||||
Sbjct: 689 ctgcaagttcctgt 702