Miyakogusa Predicted Gene
- Lj4g3v0816850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0816850.1 Non Chatacterized Hit- tr|D7L1U6|D7L1U6_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,70,2e-19,PROTEIN RER1,Retrieval of early ER protein Rer1;
Rer1,Retrieval of early ER protein
Rer1,NODE_58446_length_239_cov_286.460266.path2.1
(201 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043461 similar to UniRef100_A7PLG2 Cluster: Chromosom... 398 e-111
gnl|LJGI|TC73458 similar to UniRef100_A7PLG2 Cluster: Chromosome... 398 e-111
gnl|LJGI|TC75781 similar to UniRef100_A7PLG2 Cluster: Chromosome... 163 5e-40
gnl|LJGI|TC77167 115 1e-25
gnl|LJGI|FS338455 similar to UniRef100_A7P8Y5 Cluster: Chromosom... 56 8e-08
gnl|LJGI|TC75451 similar to UniRef100_A7P8Y5 Cluster: Chromosome... 56 8e-08
gnl|LJGI|TC63902 similar to UniRef100_A7P8Y5 Cluster: Chromosome... 56 8e-08
>gnl|LJGI|BP043461 similar to UniRef100_A7PLG2 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 505
Score = 398 bits (201), Expect = e-111
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 1 atgactttctttagtgcctttgatgttcctgtcttctggccaattctcctcttctactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 atgactttctttagtgcctttgatgttcctgtcttctggccaattctcctcttctactgg 409
Query: 61 gtgaccctcttcactcttactatgaggagacaaatagctcacatgatcagatacaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gtgaccctcttcactcttactatgaggagacaaatagctcacatgatcagatacaaatat 349
Query: 121 gtaccattttcatttggaaagatgcggtatgatggaaagcgggcatcagcagaaagcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gtaccattttcatttggaaagatgcggtatgatggaaagcgggcatcagcagaaagcaca 289
Query: 181 accctttcagatgactgaaat 201
|||||||||||||||||||||
Sbjct: 288 accctttcagatgactgaaat 268
>gnl|LJGI|TC73458 similar to UniRef100_A7PLG2 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1007
Score = 398 bits (201), Expect = e-111
Identities = 201/201 (100%)
Strand = Plus / Plus
Query: 1 atgactttctttagtgcctttgatgttcctgtcttctggccaattctcctcttctactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 atgactttctttagtgcctttgatgttcctgtcttctggccaattctcctcttctactgg 536
Query: 61 gtgaccctcttcactcttactatgaggagacaaatagctcacatgatcagatacaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gtgaccctcttcactcttactatgaggagacaaatagctcacatgatcagatacaaatat 596
Query: 121 gtaccattttcatttggaaagatgcggtatgatggaaagcgggcatcagcagaaagcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gtaccattttcatttggaaagatgcggtatgatggaaagcgggcatcagcagaaagcaca 656
Query: 181 accctttcagatgactgaaat 201
|||||||||||||||||||||
Sbjct: 657 accctttcagatgactgaaat 677
>gnl|LJGI|TC75781 similar to UniRef100_A7PLG2 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1187
Score = 163 bits (82), Expect = 5e-40
Identities = 154/178 (86%)
Strand = Plus / Plus
Query: 1 atgactttctttagtgcctttgatgttcctgtcttctggccaattctcctcttctactgg 60
||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||
Sbjct: 458 atgactttctttagtgcgtttgatgttcctgtcttctggccaatacttctcttctattgg 517
Query: 61 gtgaccctcttcactcttactatgaggagacaaatagctcacatgatcagatacaaatat 120
||| ||| ||||| || |||||||||||||| ||| | |||||||||| ||||||||||
Sbjct: 518 gtggtcctattcacgctcactatgaggagacagatatcccacatgatcaaatacaaatat 577
Query: 121 gtaccattttcatttggaaagatgcggtatgatggaaagcgggcatcagcagaaagca 178
||||| || |||||||| ||| ||| ||| ||||||| | |||||||| |||||||
Sbjct: 578 gtaccgttctcatttgggaagcagcgctatactggaaagagagcatcagctgaaagca 635
>gnl|LJGI|TC77167
Length = 550
Score = 115 bits (58), Expect = 1e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 144 gcggtatgatggaaagcgggcatcagcagaaagcacaaccctttcagatgactgaaat 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 gcggtatgatggaaagcgggcatcagcagaaagcacaaccctttcagatgactgaaat 143
>gnl|LJGI|FS338455 similar to UniRef100_A7P8Y5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 787
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 atgactttctttagtgcctttgatgttcctgtcttctggccaat 44
|||||||||||| || ||||||||||||||||||||||||||
Sbjct: 652 atgactttcttttctgtatttgatgttcctgtcttctggccaat 695
>gnl|LJGI|TC75451 similar to UniRef100_A7P8Y5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 1118
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 atgactttctttagtgcctttgatgttcctgtcttctggccaat 44
|||||||||||| || ||||||||||||||||||||||||||
Sbjct: 481 atgactttcttttctgtatttgatgttcctgtcttctggccaat 524
>gnl|LJGI|TC63902 similar to UniRef100_A7P8Y5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 736
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 atgactttctttagtgcctttgatgttcctgtcttctggccaat 44
|||||||||||| || ||||||||||||||||||||||||||
Sbjct: 526 atgactttcttttctgtatttgatgttcctgtcttctggccaat 569