Miyakogusa Predicted Gene
- Lj4g3v0772170.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0772170.2 tr|G7JCS6|G7JCS6_MEDTR Aspartic proteinase
nepenthesin-1 OS=Medicago truncatula GN=MTR_4g095270
PE=3,85.64,0,seg,NULL; CHLOROPLAST NUCLEIOD DNA-BINDING-RELATED,NULL;
ASPARTYL PROTEASES,Peptidase A1; Asp,Peptid,CUFF.48039.2
(1770 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS324137 similar to UniRef100_A7NU59 Cluster: Chromosom... 412 e-114
gnl|LJGI|DC596302 260 3e-68
gnl|LJGI|FS350560 196 3e-49
>gnl|LJGI|FS324137 similar to UniRef100_A7NU59 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 774
Score = 412 bits (208), Expect = e-114
Identities = 430/504 (85%)
Strand = Plus / Plus
Query: 173 atccccgtcgccagctccatggatccgagtccaaacgccaccctaatgctcgcatgagac 232
||||||| || ||||| || ||||||||||| ||||||| || || |||| ||||||||
Sbjct: 264 atccccgccgtcagcttcagagatccgagtccgaacgccatcccaacgctcacatgagac 323
Query: 233 tccacgatgatctcctcctcaacgggtactacacaacgcggctttggatcggtactccgc 292
|| |||| ||||| || |||||||||||||| || |||||||||||||| ||||| || |
Sbjct: 324 tctacgacgatctgcttctcaacgggtactatactacgcggctttggattggtacacctc 383
Query: 293 cgcagatgtttgctctcattgttgatacggggagtactgttacgtatgttccgtgctcgt 352
| |||| ||||||||| ||||| || || || ||||||||||| |||||||| |||||
Sbjct: 384 ctcagaagtttgctctaattgtcgacactggaagtactgttacctatgttccatgctcta 443
Query: 353 cgtgcgaacagtgtggcaggcaccaggatccaaagttccagccagacttgtcaagcacct 412
| || |||| ||||| |||||||||||| ||||||||||||||| ||| | ||||
Sbjct: 444 cttgtaaacactgtggtttgcaccaggatccgaagttccagccagacaagtcgaaaacct 503
Query: 413 atcaacctgtcaaatgcacattggattgcaattgtgatgatgacaggatgcaatgtgtgt 472
|||||||||| ||||||| | | |||||||||||| | ||||||| ||| || ||
Sbjct: 504 atcaacctgtaaaatgcagaccaggttgcaattgtgacaaggacaggaagcagtgcacgt 563
Query: 473 atgagagacagtatgctgaaatgagtactagcagtggtgtccttggtgaggatgtcatat 532
|||| |||||||| |||||| |||||| ||||||||| ||||||||||||||||| | |
Sbjct: 564 atgatagacagtacgctgaattgagtagtagcagtggggtccttggtgaggatgttgtgt 623
Query: 533 cctttggaaatcagagtgagcttgccccacagcgtgctgtttttggctgtgaaaatgttg 592
||||||||||||| |||||||||| ||| || ||||||||||||||||||||||| ||||
Sbjct: 624 cctttggaaatcaaagtgagcttggcccccaacgtgctgtttttggctgtgaaaacgttg 683
Query: 593 agactggtgatctttatagtcagcatgctgatggcatcatgggtttgggccgtggagatc 652
|||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 684 agaccggtgatctttatagtcagcatgcagatggcatcattggtttgggccgtggagatc 743
Query: 653 ttagtatcatggatcaactggttg 676
| ||||||||||||||||||||||
Sbjct: 744 taagtatcatggatcaactggttg 767
>gnl|LJGI|DC596302
Length = 577
Score = 260 bits (131), Expect = 3e-68
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1421 caggtgaactcaaaattgcacaaataacaattgcaatatcatttaacatcagttatgtgg 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 caggtgaactcaaaattgcacaaataacaattgcaatatcatttaacatcagttatgtgg 70
Query: 1481 atatgaagcctcacatcacagaattggctggattgatggcacatgagttagatgttaata 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atatgaagcctcacatcacagaattggctggattgatggcacatgagttagatgttaata 130
Query: 1541 cttcccaggtt 1551
|||||||||||
Sbjct: 131 cttcccaggtt 141
>gnl|LJGI|FS350560
Length = 715
Score = 196 bits (99), Expect = 3e-49
Identities = 162/183 (88%)
Strand = Plus / Minus
Query: 1434 aattgcacaaataacaattgcaatatcatttaacatcagttatgtggatatgaagcctca 1493
|||||| ||||||||||||| |||||||||||||||||| || ||||||||||||||||
Sbjct: 715 aattgctcaaataacaattgtaatatcatttaacatcagctacatggatatgaagcctca 656
Query: 1494 catcacagaattggctggattgatggcacatgagttagatgttaatacttcccaggttca 1553
||| ||||||||||||| | || || ||||||||||||||||||||||| ||||||||
Sbjct: 655 cattacagaattggctgacctcatagctcatgagttagatgttaatacttcgcaggttca 596
Query: 1554 cttactgaattttacctcttttggaaatggttccctctctagatgggccataaccccaag 1613
||| |||||||| | ||| ||||||||||||||||||||||||||| ||| || |||||
Sbjct: 595 cttgatgaatttttcttctcttggaaatggttccctctctagatgggtcattactccaag 536
Query: 1614 gcc 1616
|||
Sbjct: 535 gcc 533