Miyakogusa Predicted Gene

Lj4g3v0770790.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0770790.3 Non Chatacterized Hit- tr|I1JLS1|I1JLS1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,69.23,0.079,
,CUFF.48028.3
         (138 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP084816 similar to UniRef100_Q2R8T5 Cluster: MRNA capp...   274   1e-73
gnl|LJGI|TC79773 similar to UniRef100_A7PP04 Cluster: Chromosome...   220   2e-57
gnl|LJGI|TC61745 similar to UniRef100_A7PH52 Cluster: Chromosome...   220   2e-57
gnl|LJGI|TC60445 similar to UniRef100_A7PH52 Cluster: Chromosome...   113   3e-25
gnl|LJGI|BP080447 similar to UniRef100_A7PP04 Cluster: Chromosom...    50   3e-06

>gnl|LJGI|BP084816 similar to UniRef100_Q2R8T5 Cluster: MRNA capping enzyme,
           C-terminal domain containing protein, expressed; n=1;
           Oryza sativa Japonica Group|Rep: MRNA capping enzyme,
           C-terminal domain containing protein, expressed - Oryza
           sativa subsp. japonica (Rice), partial (3%)
          Length = 359

 Score =  274 bits (138), Expect = 1e-73
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcacttctcaagttcaacaaggtcactgattttgccgctatctatcttcgcttgctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atggcacttctcaagttcaacaaggtcactgattttgccgctatctatcttcgcttgctg 200

                                                                       
Query: 61  gaactattcaaggtgaggaggacatatttttggatgctctttactgtcacaaagctcata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaactattcaaggtgaggaggacatatttttggatgctctttactgtcacaaagctcata 260

                             
Query: 121 aagaaattcataaaatag 138
           ||||||||||||||||||
Sbjct: 261 aagaaattcataaaatag 278


>gnl|LJGI|TC79773 similar to UniRef100_A7PP04 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 482

 Score =  220 bits (111), Expect = 2e-57
 Identities = 129/135 (95%)
 Strand = Plus / Plus

                                                                       
Query: 4   gcacttctcaagttcaacaaggtcactgattttgccgctatctatcttcgcttgctggaa 63
           ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 158 gcactcctcaagttcaacaaggtcactgattttgctgctatctatcttcgcttgctggaa 217

                                                                       
Query: 64  ctattcaaggtgaggaggacatatttttggatgctctttactgtcacaaagctcataaag 123
           | ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 218 ccattcaaggtgaggaggacagatttttggatgctctttactgttacaaagctcataaag 277

                          
Query: 124 aaattcataaaatag 138
            ||||||||||||||
Sbjct: 278 gaattcataaaatag 292


>gnl|LJGI|TC61745 similar to UniRef100_A7PH52 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 862

 Score =  220 bits (111), Expect = 2e-57
 Identities = 129/135 (95%)
 Strand = Plus / Plus

                                                                       
Query: 4   gcacttctcaagttcaacaaggtcactgattttgccgctatctatcttcgcttgctggaa 63
           ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 659 gcactcctcaagttcaacaaggtcactgattttgctgctatctatcttcgcttgctggaa 718

                                                                       
Query: 64  ctattcaaggtgaggaggacatatttttggatgctctttactgtcacaaagctcataaag 123
           | ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 719 ccattcaaggtgaggaggacagatttttggatgctctttactgttacaaagctcataaag 778

                          
Query: 124 aaattcataaaatag 138
            ||||||||||||||
Sbjct: 779 gaattcataaaatag 793


>gnl|LJGI|TC60445 similar to UniRef100_A7PH52 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 810

 Score =  113 bits (57), Expect = 3e-25
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                       
Query: 4   gcacttctcaagttcaacaaggtcactgattttgccgctatctatcttcgcttgctggaa 63
           ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 597 gcactcctcaagttcaacaaggtcactgattttgctgctatctatcttcgcttgctggaa 656

                    
Query: 64  ctattcaag 72
           | |||||||
Sbjct: 657 ccattcaag 665


>gnl|LJGI|BP080447 similar to UniRef100_A7PP04 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 469

 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 87  tttttggatgctctttactgtcacaaagctcataaagaaattcataaaa 135
           ||||||| |||||| |||||||||||||||  ||||| | |||||||||
Sbjct: 355 tttttggttgctctctactgtcacaaagcttttaaaggagttcataaaa 307