Miyakogusa Predicted Gene

Lj4g3v0768360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0768360.1 CUFF.47999.1
         (315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598449 similar to UniRef100_A3CYW9 Cluster: Cytochrom...   488   e-137
gnl|LJGI|FS362158 similar to UniRef100_A7Q7C3 Cluster: Chromosom...   137   5e-32

>gnl|LJGI|DC598449 similar to UniRef100_A3CYW9 Cluster: Cytochrome oxidase assembly
           precursor; n=1; Shewanella baltica OS155|Rep: Cytochrome
           oxidase assembly precursor - Shewanella baltica (strain
           OS155 / ATCC BAA-1091), partial (6%)
          Length = 574

 Score =  488 bits (246), Expect = e-137
 Identities = 249/250 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtgtggctttggaattgaaagaagctgcgtctcagatttctgtttctgcactctgatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgtgtggctttggaattgaaagaagctgcgtctcagatttctgtttctgcactctgatt 384

                                                                       
Query: 61  actgcaatcagagattatatggatttatgttcttggagcctcttgctcttgtacgtttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actgcaatcagagattatatggatttatgttcttggagcctcttgctcttgtacgtttgt 444

                                                                       
Query: 121 tcgtcttgcttggtggtatttttctgctcttatttgagcctctggttgttgtccttgttt 180
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 tcgtcttgcttggtggtatttttctgctcttatttgagcctctggtcgttgtccttgttt 504

                                                                       
Query: 181 gttgggttggaatgtgtgatttcagatgctgaattttcggtgtggaaaccacaaaaagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttgggttggaatgtgtgatttcagatgctgaattttcggtgtggaaaccacaaaaagat 564

                     
Query: 241 ccttacatct 250
           ||||||||||
Sbjct: 565 ccttacatct 574


>gnl|LJGI|FS362158 similar to UniRef100_A7Q7C3 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 547

 Score =  137 bits (69), Expect = 5e-32
 Identities = 87/93 (93%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtgtggctttggaattgaaagaagctgcgtctcagatttctgtttctgcactctgatt 60
           ||||||||||||||||||||||||||||||  |||||||| |||||||||||||| ||| 
Sbjct: 419 atgtgtggctttggaattgaaagaagctgcacctcagattgctgtttctgcactccgatc 360

                                            
Query: 61  actgcaatcagagattatatggatttatgttct 93
           ||||||||||||||||||| |||||||||||||
Sbjct: 359 actgcaatcagagattataaggatttatgttct 327