Miyakogusa Predicted Gene

Lj4g3v0720730.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0720730.1 tr|B9IBM8|B9IBM8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_571999 PE=4
SV=1,78.85,5e-17,seg,NULL,CUFF.47959.1
         (336 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62793 similar to UniRef100_A7R1I5 Cluster: Chromosome...   642   0.0  

>gnl|LJGI|TC62793 similar to UniRef100_A7R1I5 Cluster: Chromosome undetermined
           scaffold_358, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_358,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (75%)
          Length = 1084

 Score =  642 bits (324), Expect = 0.0
 Identities = 331/332 (99%), Gaps = 1/332 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgcaaccttgcaatctctgcgacctccttttcgatttcacccatctctctcaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  atggctgcaaccttgcaatctctgcgacctccttttcgatttcacccatctctctcaacc 147

                                                                       
Query: 61  ccaaattcaaaccctatcacaaccaccaccgtgaatttctcctcctccaaattgatgcgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ccaaattcaaaccctatcacaaccaccaccgtgaatttctcctcctccaaattgatgcgt 207

                                                                       
Query: 121 tcaaagggttcagttttcttcactcgcaaacgtaccgatgcttctgttgtcagagcttcg 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tcaaagg-ttcagttttcttcactcgcaaacgtaccgatgcttctgttgtcagagcttcg 266

                                                                       
Query: 181 aattcggagtatagtcccagtatcacggaaaatctcggtgatgttagcattttcaccgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aattcggagtatagtcccagtatcacggaaaatctcggtgatgttagcattttcaccgct 326

                                                                       
Query: 241 gctggtcagcctgtcatgttcaaagatctctgggatcagaaccagggagtagctgtggtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gctggtcagcctgtcatgttcaaagatctctgggatcagaaccagggagtagctgtggtg 386

                                           
Query: 301 gccctgttgagacactttggatgcccatgctg 332
           ||||||||||||||||||||||||||||||||
Sbjct: 387 gccctgttgagacactttggatgcccatgctg 418