Miyakogusa Predicted Gene

Lj4g3v0684090.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0684090.1 Non Chatacterized Hit- tr|A9P8G1|A9P8G1_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,26.78,3e-18,seg,NULL,CUFF.47908.1
         (1072 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP028360 similar to UniRef100_A7QSN9 Cluster: Chromosom...   297   7e-80

>gnl|LJGI|BP028360 similar to UniRef100_A7QSN9 Cluster: Chromosome undetermined
            scaffold_161, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_161, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (11%)
          Length = 465

 Score =  297 bits (150), Expect = 7e-80
 Identities = 150/150 (100%)
 Strand = Plus / Minus

                                                                        
Query: 923  tgcattcgtttgtggtgcttatagattccatgatgagtgcagttttctatttcagttgta 982
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465  tgcattcgtttgtggtgcttatagattccatgatgagtgcagttttctatttcagttgta 406

                                                                        
Query: 983  gatcttttagcatggagaactcagaaggtgaagggaactccattttggaaactatggcca 1042
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405  gatcttttagcatggagaactcagaaggtgaagggaactccattttggaaactatggcca 346

                                          
Query: 1043 tttctgctgaaacaatgggcattcaatgac 1072
            ||||||||||||||||||||||||||||||
Sbjct: 345  tttctgctgaaacaatgggcattcaatgac 316