Miyakogusa Predicted Gene

Lj4g3v0684000.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0684000.1 Non Chatacterized Hit- tr|Q9AUW2|Q9AUW2_ORYSJ
Putative uncharacterized protein OSJNBa0040E01.12
OS=O,35.07,3e-18,seg,NULL; DUF863,Protein of unknown function DUF863,
plant,CUFF.47902.1
         (2829 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71826 similar to UniRef100_A7PN17 Cluster: Chromosome...   246   6e-64
gnl|LJGI|DC598163 similar to UniRef100_Q9XI92 Cluster: F7A19.3 p...    76   1e-12
gnl|LJGI|BP042652 UniRef100_A1W097 Cluster: Methyl-accepting che...    56   1e-06

>gnl|LJGI|TC71826 similar to UniRef100_A7PN17 Cluster: Chromosome chr14 scaffold_21,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_21, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (15%)
          Length = 642

 Score =  246 bits (124), Expect = 6e-64
 Identities = 310/372 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2436 ggggccagcaaggagagggaggcagcggagggatttccaaagggacatccttccgggtct 2495
            ||||||||||||  |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 5    ggggccagcaagacgagggaggcagcggagggatttccaaagggacatccttccaggcct 64

                                                                        
Query: 2496 tacatctttatcaaggcatgatgtaagagaagatcttcagacatttggagggcttatgaa 2555
            |   ||||||||||||||||| || | ||||||| ||||||||||||||||| |||||  
Sbjct: 65   tgtgtctttatcaaggcatgaagtgacagaagatattcagacatttggagggattatgcg 124

                                                                        
Query: 2556 agctacaggtcatgcatgggattcaggattaaccaggagaggctcttctaggaatggata 2615
            |||  |||||||| ||||| |||||||||| |||||||||  ||| || |||||||||  
Sbjct: 125  agcagcaggtcattcatggaattcaggattgaccaggagaacctcatccaggaatggaag 184

                                                                        
Query: 2616 tggcaggggtcggcgaaggtcacaggtcgcaccatctccccctccccctcctccagtggc 2675
            ||| |||||  ||||  |  | ||||| || || ||||||||  | || || ||||   |
Sbjct: 185  tgggaggggaaggcggcgtgctcaggttgccccttctcccccgacaccgccaccagcacc 244

                                                                        
Query: 2676 aatgactgaaacttgcactccattgaaacataagcttaacaatattgaattgggattgga 2735
            ||  | ||||||| |||| ||  |||  ||  ||||||| ||||||||| | ||||||||
Sbjct: 245  aaccaatgaaactagcaccccgctgatgcagcagcttaataatattgaagtcggattgga 304

                                                                        
Query: 2736 ggatagaagcctaacaggttggggcaagacaactagaaggccccgccgacagaggtgccc 2795
            |||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 305  ggataggagcctaacaggttggggcaagacaaccagaaggccccgccgacaaaggtgccc 364

                        
Query: 2796 ttcaggtaatcc 2807
            | ||||||||||
Sbjct: 365  tgcaggtaatcc 376


>gnl|LJGI|DC598163 similar to UniRef100_Q9XI92 Cluster: F7A19.3 protein; n=1;
           Arabidopsis thaliana|Rep: F7A19.3 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (5%)
          Length = 575

 Score = 75.8 bits (38), Expect = 1e-12
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                     
Query: 781 aatggtttggctgacttaaatgaacctgttcaagtggaagaa 822
           ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 419 aatggtttggctgacttgaatgaacctgttcaagtggaagaa 460



 Score = 73.8 bits (37), Expect = 5e-12
 Identities = 75/87 (86%), Gaps = 3/87 (3%)
 Strand = Plus / Plus

                                                                       
Query: 541 tccagaccctcaaaggtgaggagaaaaatgtttgatcttcacctccccgctgatgagtac 600
           |||||||| |||||||| ||||||| ||||||||| || || ||||| || |||||||||
Sbjct: 176 tccagaccatcaaaggttaggagaagaatgtttgacctccatctccctgcagatgagtac 235

                                      
Query: 601 at---tgatactgaggaaagtgaaaag 624
           ||   |||||||||||||| |||||||
Sbjct: 236 attgatgatactgaggaaaatgaaaag 262


>gnl|LJGI|BP042652 UniRef100_A1W097 Cluster: Methyl-accepting chemotaxis protein; n=2;
            Campylobacter jejuni subsp. jejuni|Rep:, partial (2%)
          Length = 499

 Score = 56.0 bits (28), Expect = 1e-06
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1384 gatggagaacagaagcatgaggagcagcttgcagcgttgccttggcttagagcgaagaca 1443
            |||||||||  ||||||||||||||  | ||| | | | ||||||||||||| |||||| 
Sbjct: 414  gatggagaattgaagcatgaggagcgtcatgctgtgcttccttggcttagagtgaagact 473

                                    
Query: 1444 aaatgtaagaatgaggcacaaaat 1467
            |  ||||||||||| |||||||||
Sbjct: 474  acttgtaagaatgaagcacaaaat 497



 Score = 54.0 bits (27), Expect = 5e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 1345 tctggaaaagatattgacttgaatgtg 1371
            |||||||||||||||||||||||||||
Sbjct: 330  tctggaaaagatattgacttgaatgtg 356