Miyakogusa Predicted Gene
- Lj4g3v0669810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0669810.1 tr|Q0D4W1|Q0D4W1_ORYSJ Os07g0600700 protein
OS=Oryza sativa subsp. japonica GN=Os07g0600700 PE=2
SV=,51.69,3e-19,Possibly involved in carbohydrate binding,X8;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,N,CUFF.47889.1
(627 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP032177 homologue to UniRef100_A2QJ31 Cluster: Contig ... 371 e-102
gnl|LJGI|TC61089 weakly similar to UniRef100_A7PDB3 Cluster: Chr... 224 5e-58
gnl|LJGI|TC58701 weakly similar to UniRef100_A7PDB3 Cluster: Chr... 224 5e-58
gnl|LJGI|TC59177 similar to UniRef100_A7PDB3 Cluster: Chromosome... 216 1e-55
>gnl|LJGI|BP032177 homologue to UniRef100_A2QJ31 Cluster: Contig An04c0180 complete
genome; n=1; Aspergillus niger|Rep: Contig An04c0180
complete, partial (0%)
Length = 519
Score = 371 bits (187), Expect = e-102
Identities = 187/187 (100%)
Strand = Plus / Minus
Query: 441 aacaggaaccggcaccggcactggcactacaacaggtagtcctactgtgtttggaataag 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aacaggaaccggcaccggcactggcactacaacaggtagtcctactgtgtttggaataag 460
Query: 501 tccaacagctacaactggtactggtggcagccttgacagtgcagctgtagtgtcttattt 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tccaacagctacaactggtactggtggcagccttgacagtgcagctgtagtgtcttattt 400
Query: 561 ggaaggcaccaacaccaagttgctattgccgttttttctaaccttctatttagccttaag 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggaaggcaccaacaccaagttgctattgccgttttttctaaccttctatttagccttaag 340
Query: 621 ggtctaa 627
|||||||
Sbjct: 339 ggtctaa 333
>gnl|LJGI|TC61089 weakly similar to UniRef100_A7PDB3 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (65%)
Length = 1256
Score = 224 bits (113), Expect = 5e-58
Identities = 273/323 (84%), Gaps = 5/323 (1%)
Strand = Plus / Plus
Query: 11 tggtgtgttttctgcttttcctagctttgactggccattcaagtgctctgtactgtgtat 70
|||||| |||| |||||||| |||| |||||||| ||||||||||||| |||||| |||
Sbjct: 230 tggtgtattttgtgcttttcttagccctgactggctattcaagtgctctttactgtatat 289
Query: 71 gcagagatggtgtgggtgatcaactccttcagaaagcaatagattatgcttgtggagctg 130
| | |||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 290 gtaaagatggtgtgggagatcaagctcttcagaaagcaatagattatgcctgtggtgctg 349
Query: 131 gagcagattgtactcctattctcca-aaacggagcttgtttccaacccaacactgtgaag 189
|||| ||||| || |||||| |||| ||| |||| ||||||||||||||||||||||||
Sbjct: 350 gagctgattgcacacctatt-tccacaaatggaggctgtttccaacccaacactgtgaag 408
Query: 190 gatcactgtaactatgcggttaatagctattaccagagaaagggtaatgttcaagggagc 249
|||||||| |||||||| || |||||||||| ||||| ||||||| | |||| || |||
Sbjct: 409 gatcactgcaactatgctgtcaatagctatttccagaaaaagggtcagattcagggaagc 468
Query: 250 tgtgatttttctggctctgcatcaacaagtccaacaccacctactacatcatcatctgca 309
||||||||| |||| |||| || ||||||||| |||||||| |||||||| ||
Sbjct: 469 tgtgattttgctggtgctgccattaccagtccaacagcacctact---gcatcatcttca 525
Query: 310 tgtgttttcccctcaagtcctgg 332
|||||||||||| |||| |||||
Sbjct: 526 tgtgttttccccacaagccctgg 548
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 463 ggcactacaacaggtagtcctactgtgtttggaataagtccaacagctacaactggtact 522
||||| || ||||| ||||||| ||| |||||||| ||||||||| | |||||||||||
Sbjct: 736 ggcacaaccacagggagtcctaatgtatttggaattagtccaacatcatcaactggtact 795
Query: 523 ggt 525
|||
Sbjct: 796 ggt 798
>gnl|LJGI|TC58701 weakly similar to UniRef100_A7PDB3 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (65%)
Length = 1260
Score = 224 bits (113), Expect = 5e-58
Identities = 273/323 (84%), Gaps = 5/323 (1%)
Strand = Plus / Plus
Query: 11 tggtgtgttttctgcttttcctagctttgactggccattcaagtgctctgtactgtgtat 70
|||||| |||| |||||||| |||| |||||||| ||||||||||||| |||||| |||
Sbjct: 140 tggtgtattttgtgcttttcttagccctgactggctattcaagtgctctttactgtatat 199
Query: 71 gcagagatggtgtgggtgatcaactccttcagaaagcaatagattatgcttgtggagctg 130
| | |||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 200 gtaaagatggtgtgggagatcaagctcttcagaaagcaatagattatgcctgtggtgctg 259
Query: 131 gagcagattgtactcctattctcca-aaacggagcttgtttccaacccaacactgtgaag 189
|||| ||||| || |||||| |||| ||| |||| ||||||||||||||||||||||||
Sbjct: 260 gagctgattgcacacctatt-tccacaaatggaggctgtttccaacccaacactgtgaag 318
Query: 190 gatcactgtaactatgcggttaatagctattaccagagaaagggtaatgttcaagggagc 249
|||||||| |||||||| || |||||||||| ||||| ||||||| | |||| || |||
Sbjct: 319 gatcactgcaactatgctgtcaatagctatttccagaaaaagggtcagattcagggaagc 378
Query: 250 tgtgatttttctggctctgcatcaacaagtccaacaccacctactacatcatcatctgca 309
||||||||| |||| |||| || ||||||||| |||||||| |||||||| ||
Sbjct: 379 tgtgattttgctggtgctgccattaccagtccaacagcacctact---gcatcatcttca 435
Query: 310 tgtgttttcccctcaagtcctgg 332
|||||||||||| |||| |||||
Sbjct: 436 tgtgttttccccacaagccctgg 458
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 463 ggcactacaacaggtagtcctactgtgtttggaataagtccaacagctacaactggtact 522
||||| || ||||| ||||||| ||| |||||||| ||||||||| | |||||||||||
Sbjct: 700 ggcacaaccacagggagtcctaatgtatttggaattagtccaacatcatcaactggtact 759
Query: 523 ggt 525
|||
Sbjct: 760 ggt 762
>gnl|LJGI|TC59177 similar to UniRef100_A7PDB3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 918
Score = 216 bits (109), Expect = 1e-55
Identities = 272/323 (84%), Gaps = 5/323 (1%)
Strand = Plus / Plus
Query: 11 tggtgtgttttctgcttttcctagctttgactggccattcaagtgctctgtactgtgtat 70
|||||| |||| |||||||| |||| |||||||| ||||||||||||| |||||| |||
Sbjct: 243 tggtgtattttgtgcttttcttagccctgactggctattcaagtgctctttactgtatat 302
Query: 71 gcagagatggtgtgggtgatcaactccttcagaaagcaatagattatgcttgtggagctg 130
| | |||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 303 gtaaagatggtgtgggagatcaagctcttcagaaagcaatagattatgcctgtggtgctg 362
Query: 131 gagcagattgtactcctattctcca-aaacggagcttgtttccaacccaacactgtgaag 189
|||| ||||| || |||||| |||| ||| |||| ||||||||||||||||||||||||
Sbjct: 363 gagctgattgcacacctatt-tccacaaatggaggctgtttccaacccaacactgtgaag 421
Query: 190 gatcactgtaactatgcggttaatagctattaccagagaaagggtaatgttcaagggagc 249
|||||||| | |||||| || |||||||||| ||||| ||||||| | |||| || |||
Sbjct: 422 gatcactgcagctatgctgtcaatagctatttccagaaaaagggtcagattcagggaagc 481
Query: 250 tgtgatttttctggctctgcatcaacaagtccaacaccacctactacatcatcatctgca 309
||||||||| |||| |||| || ||||||||| |||||||| |||||||| ||
Sbjct: 482 tgtgattttgctggtgctgccattaccagtccaacagcacctact---gcatcatcttca 538
Query: 310 tgtgttttcccctcaagtcctgg 332
|||||||||||| |||| |||||
Sbjct: 539 tgtgttttccccacaagccctgg 561