Miyakogusa Predicted Gene
- Lj4g3v0669580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0669580.1 Non Chatacterized Hit- tr|A5AU61|A5AU61_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.85,2e-17,coiled-coil,NULL; seg,NULL,CUFF.47881.1
(699 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67414 weakly similar to UniRef100_A7P0C5 Cluster: Chr... 1386 0.0
gnl|LJGI|DC598682 weakly similar to UniRef100_A7P0C5 Cluster: Ch... 981 0.0
gnl|LJGI|AV772505 155 4e-37
>gnl|LJGI|TC67414 weakly similar to UniRef100_A7P0C5 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (81%)
Length = 882
Score = 1386 bits (699), Expect = 0.0
Identities = 699/699 (100%)
Strand = Plus / Plus
Query: 1 atggccgagacagattcgtcctccccttcttcgacatctgaacccgcggcatcgctggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 atggccgagacagattcgtcctccccttcttcgacatctgaacccgcggcatcgctggcg 78
Query: 61 tcgatagcagagaatcttcagcgttctgcagttcaatctgctcgcactgtgcaacacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tcgatagcagagaatcttcagcgttctgcagttcaatctgctcgcactgtgcaacacaac 138
Query: 121 tcttccacccagtttcgtacctttcagaactttttacccaaagcagtgtcacagtataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tcttccacccagtttcgtacctttcagaactttttacccaaagcagtgtcacagtataga 198
Query: 181 acttatgaagatgctttcttcaataaagttaaagatggattgatcgttgcaaaggagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 acttatgaagatgctttcttcaataaagttaaagatggattgatcgttgcaaaggagcat 258
Query: 241 caagctttaggtgttggttttgctgtttccgctgcccttcttgctatgcgagctccaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 caagctttaggtgttggttttgctgtttccgctgcccttcttgctatgcgagctccaaga 318
Query: 301 aggtttctgtttcgtaacacattgggtcggtttcagagtgaggaggctcggtatgcaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aggtttctgtttcgtaacacattgggtcggtttcagagtgaggaggctcggtatgcaagt 378
Query: 361 gctgagaagaatgtgaaggacttgaacctttcagtagatttactgaagaaggagagcata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gctgagaagaatgtgaaggacttgaacctttcagtagatttactgaagaaggagagcata 438
Query: 421 aaattgcttgaaaggacaactcttgctgagaaggaaatgaagtatgggcataccgaacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaattgcttgaaaggacaactcttgctgagaaggaaatgaagtatgggcataccgaacta 498
Query: 481 acgatcactggagcccaacttcaacggctggcaaaatcatcatacaaggttgaagcccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 acgatcactggagcccaacttcaacggctggcaaaatcatcatacaaggttgaagcccaa 558
Query: 541 gctgctgatttaatagacaggctgcggcatatacctagtcgtgaagcactgacacttcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gctgctgatttaatagacaggctgcggcatatacctagtcgtgaagcactgacacttcga 618
Query: 601 gctgaggttgcctctttggcttcaacattgaagcggcagagatctgcgatggataaacgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gctgaggttgcctctttggcttcaacattgaagcggcagagatctgcgatggataaacgg 678
Query: 661 ataatgaagatctccgagttagggattgctgtgtgaagt 699
|||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ataatgaagatctccgagttagggattgctgtgtgaagt 717
>gnl|LJGI|DC598682 weakly similar to UniRef100_A7P0C5 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (63%)
Length = 562
Score = 981 bits (495), Expect = 0.0
Identities = 495/495 (100%)
Strand = Plus / Plus
Query: 53 cgctggcgtcgatagcagagaatcttcagcgttctgcagttcaatctgctcgcactgtgc 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgctggcgtcgatagcagagaatcttcagcgttctgcagttcaatctgctcgcactgtgc 60
Query: 113 aacacaactcttccacccagtttcgtacctttcagaactttttacccaaagcagtgtcac 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacacaactcttccacccagtttcgtacctttcagaactttttacccaaagcagtgtcac 120
Query: 173 agtatagaacttatgaagatgctttcttcaataaagttaaagatggattgatcgttgcaa 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtatagaacttatgaagatgctttcttcaataaagttaaagatggattgatcgttgcaa 180
Query: 233 aggagcatcaagctttaggtgttggttttgctgtttccgctgcccttcttgctatgcgag 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggagcatcaagctttaggtgttggttttgctgtttccgctgcccttcttgctatgcgag 240
Query: 293 ctccaagaaggtttctgtttcgtaacacattgggtcggtttcagagtgaggaggctcggt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctccaagaaggtttctgtttcgtaacacattgggtcggtttcagagtgaggaggctcggt 300
Query: 353 atgcaagtgctgagaagaatgtgaaggacttgaacctttcagtagatttactgaagaagg 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgcaagtgctgagaagaatgtgaaggacttgaacctttcagtagatttactgaagaagg 360
Query: 413 agagcataaaattgcttgaaaggacaactcttgctgagaaggaaatgaagtatgggcata 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agagcataaaattgcttgaaaggacaactcttgctgagaaggaaatgaagtatgggcata 420
Query: 473 ccgaactaacgatcactggagcccaacttcaacggctggcaaaatcatcatacaaggttg 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccgaactaacgatcactggagcccaacttcaacggctggcaaaatcatcatacaaggttg 480
Query: 533 aagcccaagctgctg 547
|||||||||||||||
Sbjct: 481 aagcccaagctgctg 495
>gnl|LJGI|AV772505
Length = 429
Score = 155 bits (78), Expect = 4e-37
Identities = 128/138 (92%), Gaps = 5/138 (3%)
Strand = Plus / Minus
Query: 565 cggcatatacctagtcgtgaagcactgacacttcgagctgaggttgcctctttggcttc- 623
||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 425 cggcatatacctaatcgtggagccctgacacttcgagctgaggttgcctctttggcttcg 366
Query: 624 aacattgaagcggcagagatctgcgatgga-taaacggataatgaagatc-tccgagtta 681
| ||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct: 365 accattgaagcggcagagatcggcgatggagtaaacggataatgaagatcttccgagtta 306
Query: 682 -gggat-tgctgtgtgaa 697
||||| |||||||||||
Sbjct: 305 tgggatgtgctgtgtgaa 288