Miyakogusa Predicted Gene
- Lj4g3v0668200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0668200.1 tr|G7JIR8|G7JIR8_MEDTR LOB domain-containing
protein OS=Medicago truncatula GN=MTR_4g083680 PE=4
SV=,85.31,0,LOB,Lateral organ boundaries, LOB; seg,NULL;
coiled-coil,NULL; DUF260,Lateral organ boundaries, LOB;,CUFF.47846.1
(528 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72156 homologue to UniRef100_Q9SHE9 Cluster: LOB doma... 1047 0.0
gnl|LJGI|FS328199 similar to UniRef100_Q9SHE9 Cluster: LOB domai... 664 0.0
gnl|LJGI|TC62094 homologue to UniRef100_A7QCS5 Cluster: Chromoso... 359 1e-98
gnl|LJGI|TC71767 homologue to UniRef100_A7QCS5 Cluster: Chromoso... 127 7e-29
gnl|LJGI|FS338249 similar to UniRef100_Q9SHE9 Cluster: LOB domai... 103 1e-21
gnl|LJGI|TC62400 similar to UniRef100_A7NZE1 Cluster: Chromosome... 64 9e-10
gnl|LJGI|TC58638 similar to UniRef100_A7NY32 Cluster: Chromosome... 56 2e-07
>gnl|LJGI|TC72156 homologue to UniRef100_Q9SHE9 Cluster: LOB domain-containing
protein 4; n=1; Arabidopsis thaliana|Rep: LOB
domain-containing protein 4 - Arabidopsis thaliana
(Mouse-ear cress), partial (67%)
Length = 945
Score = 1047 bits (528), Expect = 0.0
Identities = 528/528 (100%)
Strand = Plus / Plus
Query: 1 atgaaagagagtggtaggacgaagcagggtgtgccctctccctgtgctgcatgcaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atgaaagagagtggtaggacgaagcagggtgtgccctctccctgtgctgcatgcaagctc 110
Query: 61 ctccgtagaaggtgtgctcaggattgtgtttttgctccctatttccctgcagatgagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ctccgtagaaggtgtgctcaggattgtgtttttgctccctatttccctgcagatgagccc 170
Query: 121 cagaagtttgctaatgtgcacaaagtatttggtgccagcaatgtcaacaagatgcttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cagaagtttgctaatgtgcacaaagtatttggtgccagcaatgtcaacaagatgcttcag 230
Query: 181 gacttaccagagcatcagagaggggatgctgtgagcagcatggtgtatgaggcaaatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gacttaccagagcatcagagaggggatgctgtgagcagcatggtgtatgaggcaaatgca 290
Query: 241 agagtgagggaccctgtgtatggctgtgtaggtgccatttcatctcttcagcaacagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agagtgagggaccctgtgtatggctgtgtaggtgccatttcatctcttcagcaacagatt 350
Query: 301 gatctgcttcagacccaattggcagtagctcaggctgaagctgtgcacctcagggtgcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gatctgcttcagacccaattggcagtagctcaggctgaagctgtgcacctcagggtgcgc 410
Query: 361 cagagtactgcatcatctctctggaacccatgtcatggcccaactagccccacctacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cagagtactgcatcatctctctggaacccatgtcatggcccaactagccccacctacact 470
Query: 421 agtgtccctccatcatccaagatccttgaatctcaagccaaacatgtttttgacatggac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agtgtccctccatcatccaagatccttgaatctcaagccaaacatgtttttgacatggac 530
Query: 481 atgatggtggaccatgctggatatggtggggattccatgtggtaatgg 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atgatggtggaccatgctggatatggtggggattccatgtggtaatgg 578
>gnl|LJGI|FS328199 similar to UniRef100_Q9SHE9 Cluster: LOB domain-containing protein
4; n=1; Arabidopsis thaliana|Rep: LOB domain-containing
protein 4 - Arabidopsis thaliana (Mouse-ear cress),
partial (38%)
Length = 699
Score = 664 bits (335), Expect = 0.0
Identities = 347/351 (98%)
Strand = Plus / Minus
Query: 178 caggacttaccagagcatcagagaggggatgctgtgagcagcatggtgtatgaggcaaat 237
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 377 caggacttaccagagcatcagagaggggatgttgtgagcagcatggtgtatgaggcaaat 318
Query: 238 gcaagagtgagggaccctgtgtatggctgtgtaggtgccatttcatctcttcagcaacag 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gcaagagtgagggaccctgtgtatggctgtgtaggtgccatttcatctcttcagcaacag 258
Query: 298 attgatctgcttcagacccaattggcagtagctcaggctgaagctgtgcacctcagggtg 357
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 257 attgatatgcttcagacccaattggcagtagttcaggctgaagctgtgcacctcagggtg 198
Query: 358 cgccagagtactgcatcatctctctggaacccatgtcatggcccaactagccccacctac 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 197 cgccagagtactgcatcatctctctggaacccatgtcatggcccaactagccccacttac 138
Query: 418 actagtgtccctccatcatccaagatccttgaatctcaagccaaacatgtttttgacatg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 actagtgtccctccatcatccaagatccttgaatctcaagccaaacatgtttttgacatg 78
Query: 478 gacatgatggtggaccatgctggatatggtggggattccatgtggtaatgg 528
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gacatgatggtggaccatgctggatatggtggggattccatgtggtaatgg 27
>gnl|LJGI|TC62094 homologue to UniRef100_A7QCS5 Cluster: Chromosome undetermined
scaffold_79, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_79, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 764
Score = 359 bits (181), Expect = 1e-98
Identities = 181/181 (100%)
Strand = Plus / Minus
Query: 1 atgaaagagagtggtaggacgaagcagggtgtgccctctccctgtgctgcatgcaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atgaaagagagtggtaggacgaagcagggtgtgccctctccctgtgctgcatgcaagctc 359
Query: 61 ctccgtagaaggtgtgctcaggattgtgtttttgctccctatttccctgcagatgagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ctccgtagaaggtgtgctcaggattgtgtttttgctccctatttccctgcagatgagccc 299
Query: 121 cagaagtttgctaatgtgcacaaagtatttggtgccagcaatgtcaacaagatgcttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cagaagtttgctaatgtgcacaaagtatttggtgccagcaatgtcaacaagatgcttcag 239
Query: 181 g 181
|
Sbjct: 238 g 238
>gnl|LJGI|TC71767 homologue to UniRef100_A7QCS5 Cluster: Chromosome undetermined
scaffold_79, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_79, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (61%)
Length = 842
Score = 127 bits (64), Expect = 7e-29
Identities = 196/240 (81%)
Strand = Plus / Plus
Query: 85 tgtgtttttgctccctatttccctgcagatgagccccagaagtttgctaatgtgcacaaa 144
||||| |||||||| ||||| || |||||||| ||||| |||||||| ||||| |||||
Sbjct: 119 tgtgtgtttgctccttattttccagcagatgaaccccaaaagtttgccaatgtccacaag 178
Query: 145 gtatttggtgccagcaatgtcaacaagatgcttcaggacttaccagagcatcagagaggg 204
|| ||||| || |||||||||||||| ||| | ||||| ||||||||||| || ||||
Sbjct: 179 gtttttggggctagcaatgtcaacaaaatgttgcaggaattaccagagcaccaacgaggc 238
Query: 205 gatgctgtgagcagcatggtgtatgaggcaaatgcaagagtgagggaccctgtgtatggc 264
||||| || || ||||| ||||| || |||||||| |||||| |||| ||||| ||
Sbjct: 239 gatgcggttaggtcaatggtatatgaagccaatgcaagggtgaggaacccagtgtacgga 298
Query: 265 tgtgtaggtgccatttcatctcttcagcaacagattgatctgcttcagacccaattggca 324
||||| || || || |||||||| ||||||||| ||||| || | || ||||||||||||
Sbjct: 299 tgtgtgggagcgatatcatctctgcagcaacaggttgatgtgttacatacccaattggca 358
>gnl|LJGI|FS338249 similar to UniRef100_Q9SHE9 Cluster: LOB domain-containing protein
4; n=1; Arabidopsis thaliana|Rep: LOB domain-containing
protein 4 - Arabidopsis thaliana (Mouse-ear cress),
partial (70%)
Length = 832
Score = 103 bits (52), Expect = 1e-21
Identities = 214/268 (79%)
Strand = Plus / Plus
Query: 80 aggattgtgtttttgctccctatttccctgcagatgagccccagaagtttgctaatgtgc 139
|||||||||| |||||||| ||||||||||||||||| ||||||||||||| | |||||
Sbjct: 355 aggattgtgtgtttgctccttatttccctgcagatgaaccccagaagtttggcagtgtgc 414
Query: 140 acaaagtatttggtgccagcaatgtcaacaagatgcttcaggacttaccagagcatcaga 199
||| || ||||| || |||||||| ||||| ||| | ||||| ||||| || || ||
Sbjct: 415 acagggtttttggagctagcaatgtgaacaaaatgttacaggagttaccggaacaccaac 474
Query: 200 gaggggatgctgtgagcagcatggtgtatgaggcaaatgcaagagtgagggaccctgtgt 259
| | ||||| || || ||||| ||||| || |||||||| |||||||| || ||||
Sbjct: 475 ggagtgatgcggttagttcgatggtatatgaagccaatgcaagggtgagggatccggtgt 534
Query: 260 atggctgtgtaggtgccatttcatctcttcagcaacagattgatctgcttcagacccaat 319
|||| || || || ||||||| ||| | |||||||| ||||| ||||||| |||||||
Sbjct: 535 atggatgcgtgggaaccatttcctctttgcagcaacaagttgatgtgcttcaaacccaat 594
Query: 320 tggcagtagctcaggctgaagctgtgca 347
||| | |||| || ||||| | ||||||
Sbjct: 595 tggtactagcacaagctgaggttgtgca 622
>gnl|LJGI|TC62400 similar to UniRef100_A7NZE1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 941
Score = 63.9 bits (32), Expect = 9e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 196 cagagaggggatgctgtgagcagcatggtgtatgaggcaaatgcaagagtgagggaccct 255
||||||| ||||||||||| |||||||||||||| |||||||| || | || |||||
Sbjct: 433 cagagagcagatgctgtgagtagcatggtgtatgaagcaaatgctaggatcagagaccca 492
Query: 256 gtgtatggctgtgtaggtgc 275
|| |||||||||| ||||||
Sbjct: 493 gtttatggctgtgcaggtgc 512
>gnl|LJGI|TC58638 similar to UniRef100_A7NY32 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 922
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 113 atgagccccagaagtttgctaatgtgcacaaagtatttggtgccagcaatgt 164
||||||||||||||||||| ||| |||||||| |||||||| ||||||||
Sbjct: 253 atgagccccagaagtttgcagctgttcacaaagtgtttggtgcaagcaatgt 304