Miyakogusa Predicted Gene
- Lj4g3v0668080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0668080.1 Non Chatacterized Hit- tr|I1NDG3|I1NDG3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.27,0,PPR,Pentatricopeptide repeat; seg,NULL;
PPR_2,Pentatricopeptide repeat; PENTATRICOPEPTIDE (PPR)
REPE,CUFF.47838.1
(2481 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV769479 weakly similar to UniRef100_A7NV40 Cluster: Ch... 513 e-144
gnl|LJGI|AV409131 similar to UniRef100_A7NV40 Cluster: Chromosom... 341 1e-92
gnl|LJGI|FS323834 similar to UniRef100_A7NV41 Cluster: Chromosom... 74 5e-12
>gnl|LJGI|AV769479 weakly similar to UniRef100_A7NV40 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 287
Score = 513 bits (259), Expect = e-144
Identities = 280/287 (97%)
Strand = Plus / Plus
Query: 1174 atgctggtctgtctcatgaatttgtgttctaaaagagtggatttagctctgggaaaacaa 1233
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgctggtctgtcacatgaatttgtgttctaaaagagtggatttagctctgggaaaacaa 60
Query: 1234 atccatgcacatatcttgaaaagcaagtggaggaatttaattgttgacaatgcagttgta 1293
|||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 61 atccatgcacatatattgaaaagcaagtggaggaatttaattgctgacaatgcatttgta 120
Query: 1294 aatttttatgcaaaatgtgggaagatatcaagtgcatttcgaacatttgatcgaatggca 1353
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatttttatgcagaatgtgggaagatatcaagtgcatttcgaacatttgatcgaatggca 180
Query: 1354 aagcgagatgtcgtatgttggacaactataattactgcttgttcccaacaagggcttgga 1413
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagcgagatgtcgtatgctggacaactataattactgcttgttcccaacaagggcttgga 240
Query: 1414 catgaagccttgttgatattgtcccaaatgctagttgatgggttctt 1460
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 catgaagccttgttgatattgtcccaaatgctaggtgatgggttctt 287
>gnl|LJGI|AV409131 similar to UniRef100_A7NV40 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 359
Score = 341 bits (172), Expect = 1e-92
Identities = 175/176 (99%)
Strand = Plus / Minus
Query: 2306 caaggaatgggcattctggagaggctctgaagctcatgtataggatgcgagctgaaggtt 2365
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 359 caaggaatgggcattctggaaaggctctgaagctcatgtataggatgcgagctgaaggtt 300
Query: 2366 ttgtggtagatgagtatatccttgcaactgtgattactgcgtgtggaggcattgagtgtg 2425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttgtggtagatgagtatatccttgcaactgtgattactgcgtgtggaggcattgagtgtg 240
Query: 2426 tagaacttgattgggatattgagtctacttcacattactcgcattcttcctaatct 2481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tagaacttgattgggatattgagtctacttcacattactcgcattcttcctaatct 184
>gnl|LJGI|FS323834 similar to UniRef100_A7NV41 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 749
Score = 73.8 bits (37), Expect = 5e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 592 gaaattagtgaaattgtctccaggagtcgtaaagatttcacaaaagaattcttcgtgcat 651
||||||||||| || ||||||| | ||||||| ||||| ||||||||||||||||||||
Sbjct: 573 gaaattagtgagatagtctccaagcgtcgtaaggattttacaaaagaattcttcgtgcac 632
Query: 652 cttca 656
|||||
Sbjct: 633 cttca 637