Miyakogusa Predicted Gene

Lj4g3v0668050.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0668050.2 tr|G7JIR3|G7JIR3_MEDTR Protein argonaute
OS=Medicago truncatula GN=MTR_4g083610 PE=4 SV=1,78.37,0,Ribonuclease
H-like,Ribonuclease H-like domain; PAZ domain,Argonaute/Dicer protein,
PAZ; seg,NULL; n,CUFF.47850.2
         (2496 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW598563 weakly similar to UniRef100_A7QM22 Cluster: Ch...   553   e-156
gnl|LJGI|TC74652                                                      373   e-102

>gnl|LJGI|BW598563 weakly similar to UniRef100_A7QM22 Cluster: Chromosome undetermined
            scaffold_123, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_123, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (8%)
          Length = 347

 Score =  553 bits (279), Expect = e-156
 Identities = 323/339 (95%), Gaps = 1/339 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1336 tggtatgaacattctgcaatgtggaaacttgggg-attataatttactatatgaattact 1394
            ||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||
Sbjct: 9    tggtatgaacattctgcaatgcggaaacttggcctattataatttactatatgaattact 68

                                                                        
Query: 1395 tgaacaaattaatgacaaggttcnnnnnnnntgtggacaacgactgcaatttcttctttg 1454
            |||||||||||||||||||||||        |||||||||| ||||||||||||||||||
Sbjct: 69   tgaacaaattaatgacaaggttcaaaaaaaatgtggacaactactgcaatttcttctttg 128

                                                                        
Query: 1455 tgtgatggctggcaaagatcaaggttacaagtgcctcaagtggattgctgagaccaaggt 1514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129  tgtgatggctggcaaagatcaaggttacaagtgcctcaagtggattgctgagaccaaggt 188

                                                                        
Query: 1515 tggcttagtgacacaatgctgcttatctggtaatgctaatgaaggatcagaccaatatct 1574
            ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 189  tggcttaatgacacaatgctgcttatctggtaatgctaatgaaggatcataccaatatct 248

                                                                        
Query: 1575 cactaatctggctctcaaaatcaatgcaaaaattggaggcactaatgtggagcttgttaa 1634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249  cactaatctggctctcaaaatcaatgcaaaaattggaggcactaatgtggagcttgttaa 308

                                                   
Query: 1635 ccggctcccacacatagacggtgaaggtgatgttatgtt 1673
            ||||||||||||||||||| |||||||||||||||||||
Sbjct: 309  ccggctcccacacatagacagtgaaggtgatgttatgtt 347


>gnl|LJGI|TC74652 
          Length = 550

 Score =  373 bits (188), Expect = e-102
 Identities = 197/200 (98%)
 Strand = Plus / Plus

                                                                        
Query: 2297 tgtactatgctgatcttgctgcttatagaggacgactatactatgaagcgaagattgggg 2356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgtactatgctgatcttgctgcttatagaggacgactatactatgaagcgaagattgggg 60

                                                                        
Query: 2357 tgcaatctccaggttcaaattcatcttcttcgtcatctcctttggcttcttcgtcatttt 2416
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tgccatctccaggttcaaattcatcttcttcgtcatctcctttggcttcttcgtcatttt 120

                                                                        
Query: 2417 cttcaatagcgtcatattcgaatgatgcatcttgttacaagctgcaccctactatggaaa 2476
            |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121  cttccatagcgtcatattcgaatgatgcatcttgttaccagctgcaccctactatggaaa 180

                                
Query: 2477 atgtaatgttcttcgtttga 2496
            ||||||||||||||||||||
Sbjct: 181  atgtaatgttcttcgtttga 200