Miyakogusa Predicted Gene

Lj4g3v0668050.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0668050.1 tr|G7JIR3|G7JIR3_MEDTR Protein argonaute
OS=Medicago truncatula GN=MTR_4g083610 PE=4
SV=1,74.14,0,PAZ,Argonaute/Dicer protein, PAZ; PIWI,Stem cell
self-renewal protein Piwi; Ribonuclease H-like,Ribo,CUFF.47850.1
         (3306 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW598563 weakly similar to UniRef100_A7QM22 Cluster: Ch...   553   e-156
gnl|LJGI|TC74652                                                      373   e-102

>gnl|LJGI|BW598563 weakly similar to UniRef100_A7QM22 Cluster: Chromosome undetermined
            scaffold_123, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_123, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (8%)
          Length = 347

 Score =  553 bits (279), Expect = e-156
 Identities = 323/339 (95%), Gaps = 1/339 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2146 tggtatgaacattctgcaatgtggaaacttgggg-attataatttactatatgaattact 2204
            ||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||
Sbjct: 9    tggtatgaacattctgcaatgcggaaacttggcctattataatttactatatgaattact 68

                                                                        
Query: 2205 tgaacaaattaatgacaaggttcnnnnnnnntgtggacaacgactgcaatttcttctttg 2264
            |||||||||||||||||||||||        |||||||||| ||||||||||||||||||
Sbjct: 69   tgaacaaattaatgacaaggttcaaaaaaaatgtggacaactactgcaatttcttctttg 128

                                                                        
Query: 2265 tgtgatggctggcaaagatcaaggttacaagtgcctcaagtggattgctgagaccaaggt 2324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129  tgtgatggctggcaaagatcaaggttacaagtgcctcaagtggattgctgagaccaaggt 188

                                                                        
Query: 2325 tggcttagtgacacaatgctgcttatctggtaatgctaatgaaggatcagaccaatatct 2384
            ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 189  tggcttaatgacacaatgctgcttatctggtaatgctaatgaaggatcataccaatatct 248

                                                                        
Query: 2385 cactaatctggctctcaaaatcaatgcaaaaattggaggcactaatgtggagcttgttaa 2444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249  cactaatctggctctcaaaatcaatgcaaaaattggaggcactaatgtggagcttgttaa 308

                                                   
Query: 2445 ccggctcccacacatagacggtgaaggtgatgttatgtt 2483
            ||||||||||||||||||| |||||||||||||||||||
Sbjct: 309  ccggctcccacacatagacagtgaaggtgatgttatgtt 347


>gnl|LJGI|TC74652 
          Length = 550

 Score =  373 bits (188), Expect = e-102
 Identities = 197/200 (98%)
 Strand = Plus / Plus

                                                                        
Query: 3107 tgtactatgctgatcttgctgcttatagaggacgactatactatgaagcgaagattgggg 3166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgtactatgctgatcttgctgcttatagaggacgactatactatgaagcgaagattgggg 60

                                                                        
Query: 3167 tgcaatctccaggttcaaattcatcttcttcgtcatctcctttggcttcttcgtcatttt 3226
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tgccatctccaggttcaaattcatcttcttcgtcatctcctttggcttcttcgtcatttt 120

                                                                        
Query: 3227 cttcaatagcgtcatattcgaatgatgcatcttgttacaagctgcaccctactatggaaa 3286
            |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121  cttccatagcgtcatattcgaatgatgcatcttgttaccagctgcaccctactatggaaa 180

                                
Query: 3287 atgtaatgttcttcgtttga 3306
            ||||||||||||||||||||
Sbjct: 181  atgtaatgttcttcgtttga 200