Miyakogusa Predicted Gene
- Lj4g3v0667970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0667970.1 Non Chatacterized Hit- tr|I3SIX3|I3SIX3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,96.23,0,SYNAPTOBREVIN,Synaptobrevin; V_SNARE,Synaptobrevin;
seg,NULL; Synaptobrevin,Synaptobrevin; no descri,CUFF.47835.1
(459 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62632 similar to UniRef100_A7QTI2 Cluster: Chromosome... 724 0.0
gnl|LJGI|BP048976 homologue to UniRef100_A7QKU3 Cluster: Chromos... 646 0.0
gnl|LJGI|TC69093 similar to UniRef100_A7QKU3 Cluster: Chromosome... 389 e-107
gnl|LJGI|FS354494 similar to UniRef100_A7QKU3 Cluster: Chromosom... 285 1e-76
gnl|LJGI|GO023541 similar to UniRef100_A7QKU3 Cluster: Chromosom... 143 1e-33
gnl|LJGI|TC74310 similar to UniRef100_P47192 Cluster: Vesicle-as... 90 1e-17
gnl|LJGI|TC66535 similar to UniRef100_A7QKU3 Cluster: Chromosome... 82 3e-15
gnl|LJGI|FS328139 similar to UniRef100_Q4UMI6 Cluster: Arp2/3 co... 58 5e-08
>gnl|LJGI|TC62632 similar to UniRef100_A7QTI2 Cluster: Chromosome undetermined
scaffold_168, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (96%)
Length = 1027
Score = 724 bits (365), Expect = 0.0
Identities = 365/365 (100%)
Strand = Plus / Plus
Query: 95 ccgccacagctgctcctaacagcctgaacaaggaatttgggcccaagttgaaggaacaca 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ccgccacagctgctcctaacagcctgaacaaggaatttgggcccaagttgaaggaacaca 534
Query: 155 tgcagtactgtgttgatcatcctgaagaggttagcaagctggcaaaggtgaaagctcagg 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgcagtactgtgttgatcatcctgaagaggttagcaagctggcaaaggtgaaagctcagg 594
Query: 215 tttctgaagttaaaggtgtcatgatggagaatattgaaaaggttctggacaggggggaaa 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tttctgaagttaaaggtgtcatgatggagaatattgaaaaggttctggacaggggggaaa 654
Query: 275 agattgagcttctggttgacaagactgagaacctccatcaccaggcacaagacttcagga 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 agattgagcttctggttgacaagactgagaacctccatcaccaggcacaagacttcagga 714
Query: 335 attctgggaccaaaatccgccgaaaaatgtggctgcaaaatatgaagatcaagctgattg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 attctgggaccaaaatccgccgaaaaatgtggctgcaaaatatgaagatcaagctgattg 774
Query: 395 tgttggcgatattgatagccctgattctcatcatagtccttcccatcgtccttcgtaaat 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tgttggcgatattgatagccctgattctcatcatagtccttcccatcgtccttcgtaaat 834
Query: 455 gaaaa 459
|||||
Sbjct: 835 gaaaa 839
>gnl|LJGI|BP048976 homologue to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (52%)
Length = 568
Score = 646 bits (326), Expect = 0.0
Identities = 326/326 (100%)
Strand = Plus / Minus
Query: 134 ggcccaagttgaaggaacacatgcagtactgtgttgatcatcctgaagaggttagcaagc 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggcccaagttgaaggaacacatgcagtactgtgttgatcatcctgaagaggttagcaagc 396
Query: 194 tggcaaaggtgaaagctcaggtttctgaagttaaaggtgtcatgatggagaatattgaaa 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tggcaaaggtgaaagctcaggtttctgaagttaaaggtgtcatgatggagaatattgaaa 336
Query: 254 aggttctggacaggggggaaaagattgagcttctggttgacaagactgagaacctccatc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aggttctggacaggggggaaaagattgagcttctggttgacaagactgagaacctccatc 276
Query: 314 accaggcacaagacttcaggaattctgggaccaaaatccgccgaaaaatgtggctgcaaa 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 accaggcacaagacttcaggaattctgggaccaaaatccgccgaaaaatgtggctgcaaa 216
Query: 374 atatgaagatcaagctgattgtgttggcgatattgatagccctgattctcatcatagtcc 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atatgaagatcaagctgattgtgttggcgatattgatagccctgattctcatcatagtcc 156
Query: 434 ttcccatcgtccttcgtaaatgaaaa 459
||||||||||||||||||||||||||
Sbjct: 155 ttcccatcgtccttcgtaaatgaaaa 130
Score = 73.8 bits (37), Expect = 8e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 99 cacagctgctcctaacagcctgaacaaggaatttggg 135
|||||||||||||||||||||||||||||||||||||
Sbjct: 568 cacagctgctcctaacagcctgaacaaggaatttggg 532
>gnl|LJGI|TC69093 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (97%)
Length = 1145
Score = 389 bits (196), Expect = e-107
Identities = 292/324 (90%)
Strand = Plus / Plus
Query: 112 aacagcctgaacaaggaatttgggcccaagttgaaggaacacatgcagtactgtgttgat 171
|||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 485 aacagccttaacaaggaatttgggccaaaattgaaggaacatatgcagtactgtgttgat 544
Query: 172 catcctgaagaggttagcaagctggcaaaggtgaaagctcaggtttctgaagttaaaggt 231
|||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 545 catcctgaagagataagcaagcttgcaaaggtgaaagctcaggtttctgaagttaaaggt 604
Query: 232 gtcatgatggagaatattgaaaaggttctggacaggggggaaaagattgagcttctggtt 291
||||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 605 gtcatgatggagaatatagaaaaggttctggacaggggtgaaaagatagagcttttggtg 664
Query: 292 gacaagactgagaacctccatcaccaggcacaagacttcaggaattctgggaccaaaatc 351
||||||||||||||||| ||||||||||||||||| ||||| | |||||| ||| ||||
Sbjct: 665 gacaagactgagaaccttcatcaccaggcacaagatttcagaacttctggaacctcaatc 724
Query: 352 cgccgaaaaatgtggctgcaaaatatgaagatcaagctgattgtgttggcgatattgata 411
| || ||||||||||||||||| |||||||| ||||||||||| ||| || ||||||
Sbjct: 725 agacggaaaatgtggctgcaaaacatgaagataaagctgattgtactgggaattttgata 784
Query: 412 gccctgattctcatcatagtcctt 435
|| ||||| ||||| |||||||||
Sbjct: 785 gcactgatcctcataatagtcctt 808
>gnl|LJGI|FS354494 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 684
Score = 285 bits (144), Expect = 1e-76
Identities = 144/144 (100%)
Strand = Plus / Minus
Query: 316 caggcacaagacttcaggaattctgggaccaaaatccgccgaaaaatgtggctgcaaaat 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caggcacaagacttcaggaattctgggaccaaaatccgccgaaaaatgtggctgcaaaat 255
Query: 376 atgaagatcaagctgattgtgttggcgatattgatagccctgattctcatcatagtcctt 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atgaagatcaagctgattgtgttggcgatattgatagccctgattctcatcatagtcctt 195
Query: 436 cccatcgtccttcgtaaatgaaaa 459
||||||||||||||||||||||||
Sbjct: 194 cccatcgtccttcgtaaatgaaaa 171
>gnl|LJGI|GO023541 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (90%)
Length = 770
Score = 143 bits (72), Expect = 1e-33
Identities = 165/196 (84%)
Strand = Plus / Plus
Query: 113 acagcctgaacaaggaatttgggcccaagttgaaggaacacatgcagtactgtgttgatc 172
||||||| ||||| ||||||||||| || |||||| |||| ||||| || ||||||||||
Sbjct: 407 acagcctaaacaaagaatttgggcctaaattgaagcaacaaatgcaatattgtgttgatc 466
Query: 173 atcctgaagaggttagcaagctggcaaaggtgaaagctcaggtttctgaagttaaaggtg 232
||||||||||| | |||||||| || || ||||| ||||| ||||||||||| ||||| |
Sbjct: 467 atcctgaagagatcagcaagcttgccaaagtgaaggctcaagtttctgaagtcaaaggag 526
Query: 233 tcatgatggagaatattgaaaaggttctggacaggggggaaaagattgagcttctggttg 292
| |||||||| || ||||| |||||||| ||| | || |||||||||||| | | || |
Sbjct: 527 ttatgatggaaaacattgagaaggttcttgaccgtggagaaaagattgagatgttagtgg 586
Query: 293 acaagactgagaacct 308
|||||||||| |||||
Sbjct: 587 acaagactgacaacct 602
>gnl|LJGI|TC74310 similar to UniRef100_P47192 Cluster: Vesicle-associated membrane
protein 722; n=1; Arabidopsis thaliana|Rep:
Vesicle-associated membrane protein 722 - Arabidopsis
thaliana (Mouse-ear cress), partial (40%)
Length = 634
Score = 89.7 bits (45), Expect = 1e-17
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 202 gtgaaagctcaggtttctgaagttaaaggtgtcatgatggagaatattgaaaaggttctg 261
||||||||||||||||||||||| ||||| || |||||||| |||||||| ||||||||
Sbjct: 3 gtgaaagctcaggtttctgaagtcaaaggagttatgatggaaaatattgagaaggttctt 62
Query: 262 gacaggggggaaaagattgagcttctggt 290
||| | ||||| || ||||||||| ||||
Sbjct: 63 gaccgtggggagaaaattgagcttttggt 91
>gnl|LJGI|TC66535 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (65%)
Length = 722
Score = 81.8 bits (41), Expect = 3e-15
Identities = 116/137 (84%), Gaps = 3/137 (2%)
Strand = Plus / Plus
Query: 121 aacaaggaatttgggcccaagttgaaggaacacatgcagtactgtgttgatcatcctgaa 180
||||| ||||||||||| ||| ||||||| || |||||||||||||| || ||||| ||
Sbjct: 563 aacaaagaatttgggccaaagctgaaggagcaaatgcagtactgtgtggagcatccagag 622
Query: 181 gaggttagcaagctggcaaaggtgaaagctcaggtttctgaagttaaaggtgtcatgatg 240
||||||| ||| || || || ||||||||||| |||||||| || |||| || ||||||
Sbjct: 623 gaggttaacaaacttgctaaagtgaaagctcaagtttctga-gtcaaagaagt-atgatg 680
Query: 241 gagaatattgaaaaggt 257
|| ||||||||||||||
Sbjct: 681 ga-aatattgaaaaggt 696
>gnl|LJGI|FS328139 similar to UniRef100_Q4UMI6 Cluster: Arp2/3 complex-activating
protein rickA; n=1; Rickettsia felis|Rep: Arp2/3
complex-activating protein rickA - Rickettsia felis
(Rickettsia azadi), partial (5%)
Length = 666
Score = 58.0 bits (29), Expect = 5e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 229 ggtgtcatgatggagaatattgaaaaggt 257
|||||||||||||||||||||||||||||
Sbjct: 1 ggtgtcatgatggagaatattgaaaaggt 29